RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 MS4A12Q9NXJ0 267 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SBF1O95248 1867 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 FAM170BA6NMN3 283 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 GTPBP1O00178 669 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 HNRNPA1P09651 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CAPZA2P47755 286 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 NCS1P62166 190 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SLC13A2Q13183 592 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SMN1Q16637 294 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 Q6ZPB1 254 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 C6orf120Q7Z4R8 191 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CARM1Q86X55 608 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 PEX5LQ8IYB4 626 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 FAM98AQ8NCA5 519 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 OR9Q2Q8NGE9 314 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 PDLIM5Q96HC4 596 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 LRIG1Q96JA1 1093 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CRISPLD2Q9H0B8 497 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 DCAF13Q9NV06 445 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 ARNTLO00327 626 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 DCNP07585 359 aaKnown RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 PCSK2P16519 638 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ITGA1P56199 1179 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 GSTM4Q03013 218 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 GPNMBQ14956 572 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ZSWIM7Q19AV6 140 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 CPXM2Q8N436 756 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 RASSF5Q8WWW0 418 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 PIGKQ92643 395 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 BTBD1Q9H0C5 482 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 LMAN1LQ9HAT1 526 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 OLAHQ9NV23 265 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 B4DGG1 531 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 SLC22A1O15245 554 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 SCN2BO60939 215 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 LCKP06239 509 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 CLDN2P57739 230 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 SKP1P63208 163 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ACVR1Q04771 509 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF234Q14588 700 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 DEFB134Q4QY38 66 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 RPS26P11Q5JNZ5 115 aaPredicted RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 GOLM1Q8NBJ4 401 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 PIGXQ8TBF5 258 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 UCK2Q9BZX2 261 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ABCG2Q9UNQ0 655 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 H3BNC9 293 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ALPPP05187 535 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 GRIA2P42262 883 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 C5orf22Q49AR2 442 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 SLC35F1Q5T1Q4 408 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF776Q68DI1 518 aaPredicted RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 TMPRSS11AQ6ZMR5 421 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 KRT74Q7RTS7 529 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 MEX3DQ86XN8 651 aaKnown RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 TMEM151AQ8N4L1 468 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 IPCEF1Q8WWN9 437 aaPredicted RBP13.72□□□□□ -0.21
TMEM47-201ENST00000275954 FGF14Q92915 247 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 LTB4R2Q9NPC1 389 aa13.72□□□□□ -0.21
TMEM47-201ENST00000275954 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 MATN1P21941 496 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 PSMB5P28074 263 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 SLC36A3Q495N2 470 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 CHMP1BQ7LBR1 199 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 C16orf78Q8WTQ4 265 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 FAM3CQ92520 227 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.21
TMEM47-201ENST00000275954 FXYD1O00168 92 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 PSIP1O75475 530 aaKnown RBP13.71□□□□□ -0.21
TMEM47-201ENST00000275954 PFKLP17858 780 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 KHKP50053 298 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 RGNQ15493 299 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF829Q3KNS6 432 aaPredicted RBP13.71□□□□□ -0.21
TMEM47-201ENST00000275954 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.21
TMEM47-201ENST00000275954 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 OR10H4Q8NGA5 316 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 MRPL38Q96DV4 380 aaKnown RBP13.71□□□□□ -0.21
TMEM47-201ENST00000275954 CLMPQ9H6B4 373 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 RDH14Q9HBH5 336 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.21
TMEM47-201ENST00000275954 SHMT2P34897 504 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 GJA4P35212 333 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 TPTEP56180 551 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 NFATC3Q12968 1075 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 SLAMF1Q13291 335 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 ANKRD34AQ69YU3 496 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 TBPL2Q6SJ96 375 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 GRHL3Q8TE85 626 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 ITPAQ9BY32 194 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 NDEL1Q9GZM8 345 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 NEUROD4Q9HD90 331 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 RNF6Q9Y252 685 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms