RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ARRDC3Q96B67 414 aa13.14□□□□□ -0.31
NPC1-201ENST00000269228 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
NPC1-201ENST00000269228 MCUBQ9NWR8 336 aa13.14□□□□□ -0.31
NPC1-201ENST00000269228 ASNA1O43681 348 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 MAGP20916 626 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 RAB14P61106 215 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 CLIP4Q8N3C7 705 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 RHBDD1Q8TEB9 315 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 FAM210AQ96ND0 272 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CD180Q99467 661 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 LDAHQ9H6V9 325 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 PRSS38A1L453 326 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 HCRTR2O43614 444 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 SCO2O43819 266 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 SNTA1Q13424 505 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 LINC00471Q8N535 108 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 DPH2Q9BQC3 489 aaPredicted RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 COMMD4Q9H0A8 199 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CENPMQ9NSP4 180 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CD38P28907 300 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 PARM1Q6UWI2 310 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 FAM131AQ6UXB0 335 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CLECL1Q8IZS7 167 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 OR2L2Q8NH16 312 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 C16orf78Q8WTQ4 265 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 NEIL2Q969S2 332 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 POLR2J2Q9GZM3 115 aaKnown RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 GSTO2Q9H4Y5 243 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 CD320Q9NPF0 282 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 BRD7Q9NPI1 651 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 ACTR10Q9NZ32 417 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 NKX1-2Q9UD57 310 aaPredicted RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 SCAMP2O15127 329 aaKnown RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 CBLP22681 906 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 NUDT6P53370 316 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 KCNC4Q03721 635 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 FADDQ13158 208 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 TCTE1Q5JU00 501 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 ZNF551Q7Z340 670 aaPredicted RBP13.13□□□□□ -0.31
NPC1-201ENST00000269228 OR52E1Q8NGJ3 308 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 TSSK6Q9BXA6 273 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 DKKL1Q9UK85 242 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 ADAMTS6Q9UKP5 1117 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
NPC1-201ENST00000269228 NPIPA5E9PKD4 350 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 ZNF821O75541 412 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 CSTAP01040 98 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 LAMP1P11279 417 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 SMSP52788 366 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 CARM1Q86X55 608 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 NPIPA1Q9UND3 350 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 FOXA1P55317 472 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 NSDHLQ15738 373 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 SLC15A3Q8IY34 581 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 LNX2Q8N448 690 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 G6PC3Q9BUM1 346 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 BHLHE41Q9C0J9 482 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPC1-201ENST00000269228 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 H3BNX3 289 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 IDH3BO43837 385 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 H6PDO95479 791 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PBX2P40425 430 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 TRAM2Q15035 370 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 RGS21Q2M5E4 152 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 SPATS1Q496A3 300 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 C9orf50Q5SZB4 431 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 NDUFAF5Q5TEU4 345 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 S100ZQ8WXG8 99 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PRR11Q96HE9 360 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 TMEM30AQ9NV96 361 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 NFKBIL1Q9UBC1 381 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 IFT52Q9Y366 437 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 ENTPD2Q9Y5L3 495 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 F5P12259 2224 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms