RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CPXM2Q8N436 756 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FLCNQ8NFG4 579 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 HSH2DQ96JZ2 352 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 COL21A1Q96P44 957 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 OR5M11Q96RB7 305 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FAM126AQ9BYI3 521 aaPredicted RBP15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 KCNH6Q9H252 994 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SMURF1Q9HCE7 757 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 DMDP11532 3685 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 WNT9AO14904 365 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KCNC3Q14003 757 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PCBP2Q15366 365 aaKnown RBP eCLIP15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MED22Q15528 200 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TSTQ16762 297 aaKnown RBP15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FBXO43Q4G163 708 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GPRC6AQ5T6X5 926 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 C22orf39Q6P5X5 142 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF767PQ75MW2 155 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CACUL1Q86Y37 369 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KXD1Q9BQD3 176 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PLA2G2FQ9BZM2 168 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LRTM1Q9HBL6 345 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GPRC5BQ9NZH0 403 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SLC23A1Q9UHI7 598 aa15.27■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DOCK8Q8NF50 2099 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FRYLO94915 3013 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 A0A1W2PQ09 198 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CCDC182A6NF36 153 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 WASH3PC4AMC7 463 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SMLR1H3BR10 107 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SOCS5O75159 536 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 BCKDHAP12694 445 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF250P15622 560 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DGKAP23743 735 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MYL9P24844 172 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 BNC1Q01954 994 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MAD2L1Q13257 205 aaPredicted RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF79Q15937 498 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LRIF1Q5T3J3 769 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PDE12Q6L8Q7 609 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PLCZ1Q86YW0 608 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SCAMP4Q969E2 229 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SCRN2Q96FV2 425 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 METTL2AQ96IZ6 378 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TPD52L3Q96J77 140 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■■□□ 14.9
MAP1LC3B-201ENST00000268607 PLCXD1Q9NUJ7 323 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CLDND1Q9NY35 253 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 V9GYH0 126 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PTPN6P29350 595 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 S100A3P33764 101 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MLLT3P42568 568 aaPredicted RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 B4GALNT1Q00973 533 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 USP39Q53GS9 565 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 C10orf62Q5T681 223 aaPredicted RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LAX1Q8IWV1 398 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ASB15Q8WXK1 588 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 COQ8BQ96D53 544 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CNPPD1Q9BV87 410 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF576Q9H609 170 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DYRK4Q9NR20 520 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 EIF3KQ9UBQ5 218 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KLK4Q9Y5K2 254 aa15.26■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GON4LQ3T8J9 2241 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TRBV5-4A0A0C4DH59 114 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 EFCAB10A6NFE3 127 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TSPAN4O14817 238 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TSC22D2O75157 780 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ULK1O75385 1050 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LRATO95237 230 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SEMG1P04279 462 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MSL3P1P0C860 447 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GGT2P36268 569 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PRIM2P49643 509 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HYAL2Q12891 473 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DOC2BQ14184 412 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DHCR24Q15392 516 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MPP7Q5T2T1 576 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF648Q5T619 568 aaPredicted RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TRMT61AQ96FX7 289 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TMEM80Q96HE8 168 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DPH2Q9BQC3 489 aaPredicted RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 EXOSC4Q9NPD3 245 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 B4GALT6Q9UBX8 382 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DLGAP4Q9Y2H0 992 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HEPACAM2A8MVW5 462 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 E9PQ18 207 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 H3BM21 787 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 I3L521 148 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 C9P02748 559 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ADRA2AP08913 450 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RPS3P23396 243 aaKnown RBP eCLIP15.25■□□□□ 0.038e-13■■■■■ 32.9
MAP1LC3B-201ENST00000268607 CCR7P32248 378 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SOX9P48436 509 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TGM4P49221 684 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms