RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 IFT52Q9Y366 437 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
BEST3-201ENST00000266661 HIDE1A8MVS5 230 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 C5orf67F2Z3F1 127 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF197O14709 1029 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 PAPLNO95428 1278 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 RB1P06400 928 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 RHCEP18577 417 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 IGFBP4P22692 258 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ACADLP28330 430 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 PPM1AP35813 382 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 IDH2P48735 452 aaKnown RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 EIF2B2P49770 351 aaKnown RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 TAS2R50P59544 299 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF45Q02386 682 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 CYP27C1Q4G0S4 372 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 FRMPD2BQ6IN97 320 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 KLHL17Q6TDP4 642 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 IKBIPQ70UQ0 350 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 PARS2Q7L3T8 475 aaKnown RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF367Q7RTV3 350 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 FAM129CQ86XR2 697 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 B3GNT7Q8NFL0 401 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 C9orf43Q8TAL5 461 aaPredicted RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 CHAC2Q8WUX2 184 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 LINC00615Q96LM1 132 aaPredicted RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 FAM129BQ96TA1 746 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 CENPOQ9BU64 300 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 MS4A12Q9NXJ0 267 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 TAAR2Q9P1P5 351 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 TRBC2A0A5B9 178 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 M0R129 80 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SAP18O00422 153 aaKnown RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 CCL16O15467 120 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 TBX19O60806 448 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 CCNB2O95067 398 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 KCNK2O95069 426 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 GASTP01350 101 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 IFNA14P01570 189 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 CISD3P0C7P0 127 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 DBTP11182 482 aaKnown RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 PIPP12273 146 aaPredicted RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 DDX6P26196 483 aaKnown RBP eCLIP11.87□□□□□ -0.51
BEST3-201ENST00000266661 CRISP1P54107 249 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 UGT2B15P54855 530 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SLC13A2Q13183 592 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 TEAD2Q15562 447 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 MAPK11Q15759 364 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 PLPP4Q5VZY2 271 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ADGRD2Q7Z7M1 963 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF547Q8IVP9 402 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SLC30A8Q8IWU4 369 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SYTL1Q8IYJ3 562 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 MMP21Q8N119 569 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 AMER2Q8N7J2 671 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF740Q8NDX6 193 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 KBTBD8Q8NFY9 601 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SLC5A11Q8WWX8 675 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 OR5M11Q96RB7 305 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ZNF717Q9BY31 904 aaPredicted RBP11.87□□□□□ -0.51
BEST3-201ENST00000266661 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 SACM1LQ9NTJ5 587 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 TDP1Q9NUW8 608 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 REV1Q9UBZ9 1251 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 ITM2BQ9Y287 266 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 DYRK1BQ9Y463 629 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 MAP4K5Q9Y4K4 846 aa11.87□□□□□ -0.51
BEST3-201ENST00000266661 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
BEST3-201ENST00000266661 EFCAB10A6NFE3 127 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 SEMA7AO75326 666 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 SNX4O95219 450 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 GADD45GO95257 159 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 KRT75O95678 551 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 KLK1P06870 262 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 IL3P08700 152 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 UQCRC2P22695 453 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 PBLDP30039 288 aaPredicted RBP11.86□□□□□ -0.51
BEST3-201ENST00000266661 OPRD1P41143 372 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 PRIM2P49643 509 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 LIM2P55344 173 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 OLR1P78380 273 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
BEST3-201ENST00000266661 SSX1Q16384 188 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 DUSP7Q16829 419 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 TMEM201Q5SNT2 666 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 TPRG1LQ5T0D9 272 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 SAXO2Q658L1 398 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 NLGN4XQ8N0W4 816 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 CYP4Z2PQ8N1L4 340 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 STX19Q8N4C7 294 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
BEST3-201ENST00000266661 FAM83FQ8NEG4 500 aaPredicted RBP11.86□□□□□ -0.51
BEST3-201ENST00000266661 GPR32P1Q8NGA4 272 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms