RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 KIAA0100Q14667 2235 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 TCRBV5S1A1TA0A578 114 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 BLOC1S5-TXNDC5H3BN57 136 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 XPNPEP2O43895 674 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 DRD2P14416 443 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 JUNDP17535 347 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 SLC7A9P82251 487 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 SPRED3Q2MJR0 410 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 TNFAIP8L3Q5GJ75 292 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 TMEM156Q8N614 296 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 PTCHD1Q96NR3 888 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 OR51I1Q9H343 314 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 HLA-DPB1P04440 258 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 RPS17P08708 135 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 ARSAP15289 507 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.41□□□□□ -0.26
CDH3-201ENST00000264012 HNRNPA1L2Q32P51 320 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 SLC35F1Q5T1Q4 408 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 IER5LQ5T953 404 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 OLFML2AQ68BL7 652 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 EGFL6Q8IUX8 553 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 CNTN4Q8IWV2 1026 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 MRPL43Q8N983 215 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 OR8K5Q8NH50 307 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 TCEAL4Q96EI5 215 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 TMEM80Q96HE8 168 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 C14orf105Q9NVL8 296 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 WDR37Q9Y2I8 494 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 GMEB1Q9Y692 573 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 A0A1W2PQ72 361 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 FAM172BPA6NC97 362 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 NOS1APO75052 506 aaPredicted RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 ITGA10O75578 1167 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 RPP14O95059 124 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 EDNRAP25101 427 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 SLC6A6P31641 620 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 GABRA3P34903 492 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 GJA8P48165 433 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 RPS15AP62244 130 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 PON2Q15165 354 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 CDKL4Q5MAI5 379 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 HSD11B1LQ7Z5J1 315 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 RNF6Q9Y252 685 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 FKBP7Q9Y680 259 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 CAPN14A8MX76 684 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 J3QLW9 94 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 PRODHO43272 600 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 HPRP00739 348 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 T-ENOLP0DO92 83 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 C7P10643 843 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 GP1BBP13224 206 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 ZNF19P17023 458 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 MC1RQ01726 317 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 TUBA3CQ13748 450 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 EXOC3L2Q2M3D2 409 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 GRHL2Q6ISB3 625 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 LINGO2Q7L985 606 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 CSNK1A1LQ8N752 337 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 TNFAIP8L1Q8WVP5 186 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 NKD1Q969G9 470 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 SH3YL1Q96HL8 342 aaPredicted RBP13.41□□□□□ -0.26
CDH3-201ENST00000264012 TMED9Q9BVK6 235 aa13.41□□□□□ -0.26
CDH3-201ENST00000264012 A0A1W2PPW3 197 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 AHSA1O95433 338 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ARF5P84085 180 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 RPA4Q13156 261 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ZNF234Q14588 700 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 GRIN2CQ14957 1233 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 C6orf141Q5SZD1 244 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 OR4C11Q6IEV9 310 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 TLDC1Q6P9B6 456 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 SLC36A4Q6YBV0 504 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 LRRC25Q8N386 305 aaPredicted RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 CNIH3Q8TBE1 160 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 TAMM41Q96BW9 452 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 BRD7Q9NPI1 651 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 PRODH2Q9UF12 536 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 TJP1Q07157 1748 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 MAN2B1O00754 1011 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ORC5O43913 435 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 GGT1P19440 569 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 MAP3K8P41279 467 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 RPS3AP61247 264 aaKnown RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 TUBA1BP68363 451 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 SLC3A1Q07837 685 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 AAK1Q2M2I8 961 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms