RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 HERVK_113P63132 956 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 MVKQ03426 396 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 TMEM69Q5SWH9 247 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 DNAJB8Q8NHS0 232 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 PHOSPHO1Q8TCT1 267 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 C2orf15Q8WU43 125 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 PNPLA2Q96AD5 504 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 MAPKAP1Q9BPZ7 522 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ERVK-6Q9BXR3 956 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ASF1BQ9NVP2 202 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 HMX3A6NHT5 357 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 AGPSO00116 658 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 MTX2O75431 263 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 SNAPC5O75971 98 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 VIPR2P41587 438 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ECH1Q13011 328 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 DUOXA1Q1HG43 343 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 NSMAFQ92636 917 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 RGMAQ96B86 450 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 NUS1Q96E22 293 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 HSH2DQ96JZ2 352 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 CDH10Q9Y6N8 788 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 SLIT3O75094 1523 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 A0A1W2PPW3 197 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 BOLA2-SMG1P6H3BVE0 249 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 GALTP07902 379 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 CSNK2A2P19784 350 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 AMY2BP19961 511 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 MATN1P21941 496 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 RPL10P27635 214 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 PTGER3P43115 390 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 IDH3GP51553 393 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 PIGFQ07326 219 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF829Q3KNS6 432 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 HLA-CQ95604 372 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 OR14A2Q96R54 314 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 THUMPD1Q9NXG2 353 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 VPS29Q9UBQ0 182 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 SEC14L4Q9UDX3 406 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 SLC7A8Q9UHI5 535 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 LRRC42Q9Y546 428 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 RBBP9O75884 186 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF182P17025 639 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 VIPR1P32241 457 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 CEACAM20Q6UY09 585 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 TMEM151AQ8N4L1 468 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 TCEANCQ8N8B7 351 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 LEFTY2O00292 366 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 CLCN2P51788 898 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF776Q68DI1 518 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 C17orf99Q6UX52 265 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 BOLLQ8N9W6 283 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 OR2B2Q9GZK3 357 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF358Q9NW07 568 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 FTSJ1Q9UET6 329 aa12.39□□□□□ -0.43
TTC39A-202ENST00000262676 ZFR2Q9UPR6 939 aaKnown RBP12.39□□□□□ -0.43
TTC39A-202ENST00000262676 GOSR2O14653 212 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TMEM53Q6P2H8 277 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 NUDT13Q86X67 352 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TUBA1CQ9BQE3 449 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SDK1Q7Z5N4 2213 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 F8W036 122 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ERI3O43414 337 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SDC3O75056 442 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 NTHL1P78549 312 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 C1orf61Q13536 156 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 BCL2A1Q16548 175 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 AKR1C8PQ5T2L2 129 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LIPKQ5VXJ0 399 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 HGSNATQ68CP4 663 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 UBQLNLQ8IYU4 475 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF675Q8TD23 568 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ELP5Q8TE02 316 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 DKKL1Q9UK85 242 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 RGPD8O14715 1765 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 OIP5O43482 229 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PI15O43692 258 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ABCB7O75027 752 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SIX3O95343 332 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LYPLA2O95372 231 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms