RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZNF701M0R085 212 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 GOSR2O14653 212 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 KMOO15229 486 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 EEDO75530 441 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CXCL14O95715 111 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 LDOC1O95751 146 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PROS1P07225 676 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 RETP07949 1114 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 FLT3LGP49771 235 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 GALNT7Q86SF2 657 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 TRIB2Q92519 343 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CENPMQ9NSP4 180 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF510Q9Y2H8 683 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 M0R129 80 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 UBFD1O14562 309 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 GRID2O43424 1007 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SH3BP2P78314 561 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF597Q96LX8 424 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SMOC2Q9H3U7 446 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 MRM3Q9HC36 420 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC27A6Q9Y2P4 619 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PCDHGB1Q9Y5G3 927 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 NUP188Q5SRE5 1749 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 LOC105369274A0A096LPK9 316 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SOX3P41225 446 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 KCNC1P48547 511 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 BLOC1S3Q6QNY0 202 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR4N4Q8N0Y3 316 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PARP16Q8N5Y8 322 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 NAXEQ8NCW5 288 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 TCEAL3Q969E4 200 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 C12orf42Q96LP6 360 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 ABCD2Q9UBJ2 740 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 KCNN3Q9UGI6 736 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SCP2D1Q9UJQ7 156 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 DNAJC15Q9Y5T4 150 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 LOC102723532A0A0G2JNH3 316 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PAK4O96013 591 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 FUCA1P04066 466 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CCND3P30281 292 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 LEPRP48357 1165 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 RASGEF1AQ8N9B8 481 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 ACOT12Q8WYK0 555 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC25A36Q96CQ1 311 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 EEF1E1-BLOC1S5C9J1V9 151 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF20P17024 532 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TAS2R50P59544 299 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PPIGQ13427 754 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM110CQ1W6H9 321 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 EIPR1Q53HC9 387 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 DCP2Q8IU60 420 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ESX1Q8N693 406 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM83FQ8NEG4 500 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PLD4Q96BZ4 506 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR2AG1Q9H205 316 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 NTN4Q9HB63 628 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 MGAT4BQ9UQ53 548 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 A0A0G2JLL6 359 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 SYN3O14994 580 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 LDB2O43679 373 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RENP00797 406 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PCSK6P29122 969 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM189BP81408 668 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TLE2Q04725 743 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF616Q08AN1 781 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 KIAA1324Q6UXG2 1013 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRRT2Q7Z6L0 340 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC22A15Q8IZD6 547 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PAPD5Q8NDF8 572 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR8K5Q8NH50 307 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D15Q8TC07 691 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 C15orf40Q8WUR7 153 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 STRA6Q9BX79 667 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CD244Q9BZW8 370 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 MKKSQ9NPJ1 570 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 VNN3Q9NY84 501 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RIMS3Q9UJD0 308 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TFP02787 698 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 NUDT7P0C024 238 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 EDNRBP24530 442 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 GKP32189 559 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 IGFALSP35858 605 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 BDKRB1P46663 353 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PSMD8P48556 350 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 DBPQ10586 325 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR4D1Q15615 310 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms