RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SELENBP1Q13228 472 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 MED22Q15528 200 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 TOR1AIP1Q5JTV8 583 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 IKBIPQ70UQ0 350 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 VN1R5Q7Z5H4 357 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 SLC44A2Q8IWA5 706 aaPredicted RBP14.53□□□□□ -0.08
DDX56-201ENST00000258772 TAGAPQ8N103 731 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 CYP4Z2PQ8N1L4 340 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 SETD7Q8WTS6 366 aaKnown RBP14.53□□□□□ -0.08
DDX56-201ENST00000258772 UBE2E3Q969T4 207 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 PDXPQ96GD0 296 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 NLNQ9BYT8 704 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 ROGDIQ9GZN7 287 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 SNX8Q9Y5X2 465 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 KIAA1549LQ6ZVL6 1849 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 PI15O43692 258 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 KIAA0513O60268 411 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 POU1F1P28069 291 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 LIM2P55344 173 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 WDR5P61964 334 aaKnown RBP14.53□□□□□ -0.08
DDX56-201ENST00000258772 ZNF77Q15935 545 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 DEFB115Q30KQ5 88 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 PLAG1Q6DJT9 500 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 TMIGD1Q6UXZ0 262 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 CEACAM20Q6UY09 585 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 APOBEC4Q8WW27 367 aaKnown RBP14.53□□□□□ -0.08
DDX56-201ENST00000258772 ZCCHC2Q9C0B9 1178 aaKnown RBP14.53□□□□□ -0.08
DDX56-201ENST00000258772 TSC22D4Q9Y3Q8 395 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 PCDHGA4Q9Y5G9 962 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 HCFC2Q9Y5Z7 792 aa14.53□□□□□ -0.08
DDX56-201ENST00000258772 DSPPQ9NZW4 1301 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 FAM227AF5H4B4 570 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 KCNK2O95069 426 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 MED26O95402 600 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 DLGAP3O95886 979 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 DNTTP04053 509 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 SLC15A1P46059 708 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 METAP1P53582 386 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 EPHA5P54756 1037 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 TPTEP56180 551 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 TSTQ16762 297 aaKnown RBP14.52□□□□□ -0.08
DDX56-201ENST00000258772 SLC9B2Q86UD5 537 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 ATCAYQ86WG3 371 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 ZNF547Q8IVP9 402 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 FAM46DQ8NEK8 389 aa14.52□□□□□ -0.08
DDX56-201ENST00000258772 KIF26AQ9ULI4 1882 aaPredicted RBP14.52□□□□□ -0.08
DDX56-201ENST00000258772 TRBV4-1A0A0J9YWV2 114 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 CCRL2O00421 344 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 ARHGAP33O14559 1287 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 HAT1O14929 419 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 SPINT1O43278 529 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 POP7O75817 140 aaKnown RBP14.52□□□□□ -0.09
DDX56-201ENST00000258772 ACADLP28330 430 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 DGKEP52429 567 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 TIMM50Q3ZCQ8 353 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 ARHGAP15Q53QZ3 475 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 RPS26P11Q5JNZ5 115 aaPredicted RBP14.52□□□□□ -0.09
DDX56-201ENST00000258772 HEATR4Q86WZ0 1026 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 HORMAD2Q8N7B1 307 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 SLC38A5Q8WUX1 472 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 IL17FQ96PD4 163 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 ZDHHC5Q9C0B5 715 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 TMEM165Q9HC07 324 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 TMEM39AQ9NV64 488 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 SAGE1Q9NXZ1 904 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 MARK1Q9P0L2 795 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 SPATA7Q9P0W8 599 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 PCDHGB6Q9Y5F9 930 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 NOTCH4Q99466 2003 aa14.52□□□□□ -0.09
DDX56-201ENST00000258772 C17orf113A0A1B0GUU1 675 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PAPLNO95428 1278 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PTTG1O95997 202 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PTPN2P17706 415 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 ALOX12P18054 663 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 SOX6P35712 828 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 ETV6P41212 452 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 GPR1P46091 355 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PRMT2P55345 433 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 RPS26P62854 115 aaKnown RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 DOC2BQ14184 412 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 NFE2L1Q14494 772 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PRAMEF14Q5SWL7 426 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 PRAMEF13Q5VWM6 474 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 RAET1GQ6H3X3 334 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 TNFAIP8L2Q6P589 184 aaPredicted RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 FAM129CQ86XR2 697 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 C2orf73Q8N5S3 287 aaPredicted RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 WDR36Q8NI36 951 aaKnown RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 NEURL3Q96EH8 262 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 TXNDC15Q96J42 360 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 RSPO3Q9BXY4 272 aaPredicted RBP14.51□□□□□ -0.09
DDX56-201ENST00000258772 MIR1-1HGQ9H1L0 117 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 SLC25A19Q9HC21 320 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 AHSPQ9NZD4 102 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 MKLN1Q9UL63 735 aa14.51□□□□□ -0.09
DDX56-201ENST00000258772 HTR3EA5X5Y0 456 aa14.5□□□□□ -0.09
DDX56-201ENST00000258772 C5orf58C9J3I9 102 aa14.5□□□□□ -0.09
DDX56-201ENST00000258772 SNPHO15079 494 aa14.5□□□□□ -0.09
DDX56-201ENST00000258772 FKTNO75072 461 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms