RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TRIB2Q92519 343 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 RAB39BQ96DA2 213 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ATG4CQ96DT6 458 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TXN2Q99757 166 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF629Q9UEG4 869 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ARL5AQ9Y689 179 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OAS3Q9Y6K5 1087 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRN3E7EW58 273 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SEC14L5O43304 696 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC37A4O43826 429 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CBX7O95931 251 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SERPIND1P05546 499 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF10P21506 573 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR15P49685 360 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GTF2A2P52657 109 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OAZ1P54368 228 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 EEFSECP57772 596 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GRB10Q13322 594 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SF3A2Q15428 464 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OR8G1Q15617 311 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FNDC3BQ53EP0 1204 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 MFSD14CQ5VZR4 134 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 PRR27Q6MZM9 219 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 LYPD8Q6UX82 237 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 BAIAP2L2Q6UXY1 529 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CD163Q86VB7 1156 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 APCDD1Q8J025 514 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 IL17RDQ8NFM7 739 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 DNAJB14Q8TBM8 379 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CANT1Q8WVQ1 401 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF512Q96ME7 567 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 MUS81Q96NY9 551 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 IL12RB2Q99665 862 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRN3Q9H3W5 708 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TBX20Q9UMR3 447 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 A3GALT2U3KPV4 340 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 AQP7O14520 342 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 GREM1O60565 184 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 VPS26AO75436 327 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 SLITRK3O94933 977 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 OTCP00480 354 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 RRASP10301 218 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 MEP1AQ16819 746 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRC26Q2I0M4 334 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 RNASE12Q5GAN4 147 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF311Q5JNZ3 666 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 VASNQ6EMK4 673 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 KIAA0930Q6ICG6 404 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 GSG1LQ6UXU4 331 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 MFSD6LQ8IWD5 586 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ENTHD1Q8IYW4 607 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 BEND7Q8N7W2 519 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ACER1Q8TDN7 264 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 TNFRSF14Q92956 283 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 C19orf43Q9BQ61 176 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 POTEKPQ9BYX7 375 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ENAMQ9NRM1 1142 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ZDHHC18Q9NUE0 388 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 IQCMA0A1B0GVH7 501 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 AP4M1O00189 453 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ARPC5O15511 151 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 CHST10O43529 356 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 MAFKO60675 156 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC43A1O75387 559 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 TFP02787 698 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 IFNA6P05013 189 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 PPT1P50897 306 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 PEX6Q13608 980 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 KCNAB1Q14722 419 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 DPYSL2Q16555 572 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 DCST2Q5T1A1 773 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC22A15Q8IZD6 547 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 FBXO22Q8NEZ5 403 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 TAS1R2Q8TE23 839 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 ROPN1LQ96C74 230 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 FOXRED1Q96CU9 486 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 COL21A1Q96P44 957 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 CITED2Q99967 270 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 RBM38Q9H0Z9 239 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 PCDHA2Q9Y5H9 948 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 RGPD2P0DJD1 1756 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 LOC100509620A0A075B734 347 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 A0A1W2PQ09 198 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 AGAP14A8MT82 685 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 NPC1O15118 1278 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 PRPSAP2O60256 369 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 CLIC3O95833 236 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 MT-CYBP00156 380 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 MT-ND1P03886 318 aa6.5□□□□□ -1.37
PDGFRA-201ENST00000257290 POLBP06746 335 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms