RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ANPEPP15144 967 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 HMGA1P17096 107 aaKnown RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 NR4A1P22736 598 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TAS2R43P59537 309 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CBFBQ13951 182 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FRMD7Q6ZUT3 714 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 NUP43Q8NFH3 380 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FNDC8Q8TC99 324 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 MS4A4EQ96PG1 132 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 MAPKAP1Q9BPZ7 522 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 EMC9Q9Y3B6 208 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A1B0GUL6 1792 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 C8orf89P0DMQ9 161 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PSMB9P28065 219 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 SCTRP47872 440 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 SSR4P51571 173 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PSMD7P51665 324 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 SEMG2Q02383 582 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 KCNC4Q03721 635 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 KDELC1Q6UW63 502 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 KLHDC8AQ8IYD2 350 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TEX26Q8N6G2 289 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 XKR8Q9H6D3 395 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 AJAP1Q9UKB5 411 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM14AQ9Y6G1 99 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 NPIPB15A6NHN6 443 aaPredicted RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 CLIC1O00299 241 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 H1F0P07305 194 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ADARP55265 1226 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 OR2B6P58173 313 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF678Q5SXM1 525 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ARRDC3Q96B67 414 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 RAB39BQ96DA2 213 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ARRDC1-AS1Q9H2J1 176 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 LRRN3Q9H3W5 708 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 PLAGL1Q9UM63 463 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A1W2PQ72 361 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ARHGAP33O14559 1287 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 OR2T1O43869 369 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ZXDAP98168 799 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 SFXN2Q96NB2 322 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 K7ERQ8 282 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 GALR3O60755 368 aaPredicted RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 HSMCR30P0CW71 290 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 MPLP40238 635 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 VBP1P61758 197 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 NETO1Q8TDF5 533 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 OSTF1Q92882 214 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 CLPTM1LQ96KA5 538 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 MTCH2Q9Y6C9 303 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 TNFSF14O43557 240 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 RAP2AP10114 183 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 GBX2P52951 348 aaPredicted RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 ADPRHP54922 357 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 POU4F2Q12837 409 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 DEFB134Q4QY38 66 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM184AQ6ZMB5 413 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 LARP4Q71RC2 724 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■□□□□ 10.2
PRPF38A-201ENST00000257181 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 HSD11B1LQ7Z5J1 315 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 WDR5BQ86VZ2 330 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 SFRP1Q8N474 314 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 CHRDQ9H2X0 955 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 RPL36Q9Y3U8 105 aaKnown RBP12.84□□□□□ -0.35
PRPF38A-201ENST00000257181 EFCAB9A8MZ26 197 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 BMP1P13497 986 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 CKMT2P17540 419 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 PGM2L1Q6PCE3 622 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 PKP4Q99569 1192 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 STOX2Q9P2F5 926 aaPredicted RBP12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 DNAJB9Q9UBS3 223 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.35
PRPF38A-201ENST00000257181 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 CHN2P52757 468 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 PDZK1Q5T2W1 519 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 OR5K1Q8NHB7 308 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 MYH6P13533 1939 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms