RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ADAM10O14672 748 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 PRKNO60260 465 aaPredicted RBP19.58■□□□□ 0.72
NEDD8-201ENST00000250495 CDC40O60508 579 aaKnown RBP eCLIP19.58■□□□□ 0.72
NEDD8-201ENST00000250495 OR2J2O76002 312 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 TPOP07202 933 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 TNNI3P19429 210 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 CD22P20273 847 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 GPR85P60893 370 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 SERTAD2Q14140 314 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 CDSNQ15517 529 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 ADNP2Q6IQ32 1131 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 PAOXQ6QHF9 649 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 C3P1Q6ZMU1 363 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 LRRC70Q7Z2Q7 622 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 PSD4Q8NDX1 1056 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 SPATA4Q8NEY3 305 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 OR14A16Q8NHC5 309 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 CA5BP1Q8WTZ4 195 aa19.58■□□□□ 0.72
NEDD8-201ENST00000250495 TMEM200CA6NKL6 621 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 C19orf84I3L1E1 186 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 RAD51CO43502 376 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 MSH2P43246 934 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 CAV1Q03135 178 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 TMEM35AQ53FP2 167 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 CMPK2Q5EBM0 449 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 TMEM211Q6ICI0 200 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 ARHGAP11AQ6P4F7 1023 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 IL20RBQ6UXL0 311 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 NCCRP1Q6ZVX7 275 aaPredicted RBP19.57■□□□□ 0.72
NEDD8-201ENST00000250495 RAPH1Q70E73 1250 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 CHSY3Q70JA7 882 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 OR5L2Q8NGL0 311 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 PTPMT1Q8WUK0 201 aaPredicted RBP19.57■□□□□ 0.72
NEDD8-201ENST00000250495 EXT2Q93063 718 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 LURAP1Q96LR2 239 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 PHACTR1Q9C0D0 580 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 LIN28AQ9H9Z2 209 aaKnown RBP19.57■□□□□ 0.72
NEDD8-201ENST00000250495 NMRAL1Q9HBL8 299 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 NUDT4Q9NZJ9 180 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 CSMD1Q96PZ7 3565 aa19.57■□□□□ 0.72
NEDD8-201ENST00000250495 EPORP19235 508 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 ATP5A1P25705 553 aaKnown RBP19.56■□□□□ 0.72
NEDD8-201ENST00000250495 CRABP2P29373 138 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 SSTR2P30874 369 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 KIR3DL1P43629 444 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 GPX6P59796 221 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 E2F2Q14209 437 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 AP5B1Q2VPB7 878 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 MED27Q6P2C8 311 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 C16orf47Q6ZP98 133 aaPredicted RBP19.56■□□□□ 0.72
NEDD8-201ENST00000250495 RGS9BPQ6ZS82 235 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 UBE3DQ7Z6J8 389 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 TBC1D1Q86TI0 1168 aaPredicted RBP19.56■□□□□ 0.72
NEDD8-201ENST00000250495 ISCA2Q86U28 154 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 CD163Q86VB7 1156 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 PPM1NQ8N819 430 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 ACOT4Q8N9L9 421 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 OR8K3Q8NH51 312 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF473Q8WTR7 871 aaKnown RBP19.56■□□□□ 0.72
NEDD8-201ENST00000250495 SDCCAG3Q96C92 435 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 RASL10BQ96S79 203 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 MAPKAP1Q9BPZ7 522 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 SPOCK3Q9BQ16 436 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 MS4A8Q9BY19 250 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 TRIM8Q9BZR9 551 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 OR8D2Q9GZM6 311 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 ALG9Q9H6U8 611 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 PLSCR2Q9NRY7 297 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 GRHL1Q9NZI5 618 aa19.56■□□□□ 0.72
NEDD8-201ENST00000250495 UTP11Q9Y3A2 253 aaKnown RBP19.56■□□□□ 0.72
NEDD8-201ENST00000250495 MYOCOSA0A1B0GUC4 107 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 C17orf105B2RV13 164 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 WWP2O00308 870 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 FANCGO15287 622 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 C1QAP02745 245 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 SERPINB1P30740 379 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 PLTPP55058 493 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 PLGLB1Q02325 96 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 KBTBD12Q3ZCT8 623 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF793Q6ZN11 406 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 LAS2Q8IYD9 372 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 ZNF295-AS1Q8N0V1 137 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 OR52N2Q8NGI0 321 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 OPTCQ9UBM4 332 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 ADGRE2Q9UHX3 823 aa19.55■□□□□ 0.72
NEDD8-201ENST00000250495 K7EPI3 171 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 ACOT7O00154 380 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 LDB3O75112 727 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 PDE9AO76083 593 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 OR6B1O95007 311 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 TGFB1P01137 390 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 PCNAP12004 261 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 HIST1H1TP22492 207 aaPredicted RBP19.54■□□□□ 0.72
NEDD8-201ENST00000250495 CPN2P22792 545 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 SOX3P41225 446 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 HK2P52789 917 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 PPIAP62937 165 aaKnown RBP19.54■□□□□ 0.72
NEDD8-201ENST00000250495 RNF4P78317 190 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 PCDH1Q08174 1060 aa19.54■□□□□ 0.72
NEDD8-201ENST00000250495 BIKQ13323 160 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms