RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CAMKVQ8NCB2 501 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 WDR36Q8NI36 951 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 C17orf62Q9BQA9 187 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 ABCB9Q9NP78 766 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 FARSBQ9NSD9 589 aaKnown RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 ZNF624Q9P2J8 865 aaPredicted RBP10.56□□□□□ -0.72
COPA-201ENST00000241704 SARDHQ9UL12 918 aa10.56□□□□□ -0.72
COPA-201ENST00000241704 FAM170BA6NMN3 283 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 MANBAO00462 879 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 NPC1O15118 1278 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 PCDH7O60245 1069 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 RNGTTO60942 597 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 GADD45AP24522 165 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 CDKN2DP55273 166 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SRP54P61011 504 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 PRR5P85299 388 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 MPP7Q5T2T1 576 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 DDI2Q5TDH0 399 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 TRAM1L1Q8N609 369 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SLC37A3Q8NCC5 494 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ANKRD49Q8WVL7 239 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 OR2M4Q96R27 311 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SMURF1Q9HCE7 757 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 GMPR2Q9P2T1 348 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 SEC14L3Q9UDX4 400 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SERTAD3Q9UJW9 196 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 DRD1P21728 446 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SLC6A4P31645 630 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SDC2P34741 201 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 CASRP41180 1078 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 HTR3AP46098 478 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 PSMD4P55036 377 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 GALNT1Q10472 559 aaPredicted RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 DUSP7Q16829 419 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 DEF8Q6ZN54 512 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 RTN4RL1Q86UN2 441 aaPredicted RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 ATP6V1C2Q8NEY4 427 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 C9orf43Q8TAL5 461 aaPredicted RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 DYNC2LI1Q8TCX1 351 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 GLYATL1Q969I3 302 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SCRN2Q96FV2 425 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 ZNF382Q96SR6 550 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 LINC00597Q9H2U6 94 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 CRISPLD1Q9H336 500 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ARNT2Q9HBZ2 717 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 PRAMEF33A0A0G2JMD5 474 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 HHLA1C9JL84 531 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 OR10H3O60404 316 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 PRAMEF10O60809 474 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 SNX4O95219 450 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 MYL12AP19105 171 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 GP2P55259 537 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 CST6Q15828 149 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 FAM205BPQ63HN1 556 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 KCT2Q8NC54 265 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 PAPD5Q8NDF8 572 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 RPL3LQ92901 407 aaKnown RBP10.55□□□□□ -0.72
COPA-201ENST00000241704 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 AMBNQ9NP70 447 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 TAC3Q9UHF0 121 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 TRPS1Q9UHF7 1281 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 ABCG2Q9UNQ0 655 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 MAP4K5Q9Y4K4 846 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 STON1Q9Y6Q2 735 aa10.55□□□□□ -0.72
COPA-201ENST00000241704 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
COPA-201ENST00000241704 RFXAPO00287 272 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 DLGAP1O14490 977 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 KCNK2O95069 426 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 CAPN3P20807 821 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 CA5AP35218 305 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 EMX2Q04743 252 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 PUDPQ08623 228 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 KCNC3Q14003 757 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 PTCRAQ6ISU1 281 aaPredicted RBP10.54□□□□□ -0.72
COPA-201ENST00000241704 IL22RA1Q8N6P7 574 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 COL21A1Q96P44 957 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 KCNA7Q96RP8 456 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 TRIB3Q96RU7 358 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 CSF3RQ99062 836 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 MMP28Q9H239 520 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 RNF121Q9H920 327 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 MBD2Q9UBB5 411 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 ZNF282Q9UDV7 671 aaPredicted RBP10.54□□□□□ -0.72
COPA-201ENST00000241704 KLF15Q9UIH9 416 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 B3GALNT1O75752 331 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 LCKP06239 509 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 SYPP08247 313 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 SRCP12931 536 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 JUNDP17535 347 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 MAGEA3P43357 314 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 BDKRB1P46663 353 aa10.54□□□□□ -0.72
COPA-201ENST00000241704 CXCL12P48061 93 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms