RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MGAMO43451 1857 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 LOC285095A0A1B0GVY8 99 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SMIM30A4D0T7 59 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 MAZP56270 477 aaKnown RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 CTBP2P56545 445 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SNTB1Q13884 538 aaKnown RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 TSNQ15631 228 aaKnown RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 CDC42EP5Q6NZY7 148 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 ZDHHC17Q8IUH5 632 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 KCNJ9Q92806 393 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 PPP1R16BQ96T49 567 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SHROOM3Q8TF72 1996 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 ANKDD1BA6NHY2 528 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 KPNA3O00505 521 aaPredicted RBP12.46□□□□□ -0.41
MSH2-201ENST00000233146 GADD45GO95257 159 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 GDF11O95390 407 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 PVALBP20472 110 aaPredicted RBP12.46□□□□□ -0.41
MSH2-201ENST00000233146 SPAM1P38567 509 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 POU3F4P49335 361 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 VEGFCP49767 419 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 MC2RQ01718 297 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 ST3GAL2Q16842 350 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 FAM76BQ5HYJ3 339 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 PDZD9Q8IXQ8 264 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 TMEM130Q8N3G9 435 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 OR9Q1Q8NGQ5 310 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 CNOT9Q92600 299 aaKnown RBP12.46□□□□□ -0.41
MSH2-201ENST00000233146 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSH2-201ENST00000233146 FEVQ99581 238 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 ACTR6Q9GZN1 396 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 PORCNQ9H237 461 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
MSH2-201ENST00000233146 PLSCR5A0PG75 271 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 C2orf74A8MZ97 194 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 TO15178 435 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 ADAMDEC1O15204 470 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 GLP2RO95838 553 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 VTNP04004 478 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 MLLT11Q13015 90 aaPredicted RBP12.46□□□□□ -0.42
MSH2-201ENST00000233146 DUSP4Q13115 394 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 SFRP5Q5T4F7 317 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 LIPKQ5VXJ0 399 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 ALKBH2Q6NS38 261 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 ZPBP2Q6X784 338 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 L3MBTL4Q8NA19 623 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 OR52P1PQ8NH57 321 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 SLC35F5Q8WV83 523 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 OTULINQ96BN8 352 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.42
MSH2-201ENST00000233146 KCTD7Q96MP8 289 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 ABCG5Q9H222 651 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.42
MSH2-201ENST00000233146 BRD9Q9H8M2 597 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.42
MSH2-201ENST00000233146 LANCL1O43813 399 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 CACNG3O60359 315 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 PRKRAO75569 313 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 FNTBP49356 437 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 RIDAP52758 137 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 CACNB2Q08289 660 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 FAM174BQ3ZCQ3 159 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 TEX30Q5JUR7 227 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 DMRTC2Q8IXT2 367 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 OR4A15Q8NGL6 344 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 SENP5Q96HI0 755 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 HDHD2Q9H0R4 259 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 POLR3HQ9Y535 204 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 HPP00738 406 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 IL6P05231 212 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 LCP1P13796 627 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 BPIP17213 487 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 ATP5A1P25705 553 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 SELENOPP49908 381 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 PGDP52209 483 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 CAV3P56539 151 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 EIF2S3LQ2VIR3 472 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 FBXO48Q5FWF7 155 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 TMEM88Q6PEY1 159 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 PDZD4Q76G19 769 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 DDOQ99489 341 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 METTL17Q9H7H0 456 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 GLOD4Q9HC38 313 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 LATS2Q9NRM7 1088 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms