RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CLDN19Q8N6F1 224 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 UTP15Q8TED0 518 aaKnown RBP15.24■□□□□ 0.03
SF3A2-201ENST00000221494 ZNF707Q96C28 371 aaPredicted RBP15.24■□□□□ 0.03
SF3A2-201ENST00000221494 MSLNLQ96KJ4 702 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 OR5M11Q96RB7 305 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 KCNS3Q9BQ31 491 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 MND1Q9BWT6 205 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 SMG9Q9H0W8 520 aaKnown RBP15.24■□□□□ 0.03
SF3A2-201ENST00000221494 HHATLQ9HCP6 504 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 AMBNQ9NP70 447 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 ITM2CQ9NQX7 267 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 NDUFB11Q9NX14 153 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 LSM7Q9UK45 103 aaKnown RBP15.24■□□□□ 0.03
SF3A2-201ENST00000221494 CARD8Q9Y2G2 431 aa15.24■□□□□ 0.03
SF3A2-201ENST00000221494 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 TRANK1O15050 2925 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 FAM25EA8MYX2 175 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 LEFTY2O00292 366 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 KPNA5O15131 536 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 GCM2O75603 506 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 PDE9AO76083 593 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 PNLIPRP1P54315 467 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 NTHL1P78549 312 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 ACSM2AQ08AH3 577 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 HYAL2Q12891 473 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 MLLT11Q13015 90 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 CCNJQ5T5M9 372 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 ACSM2BQ68CK6 577 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 ZNF438Q7Z4V0 828 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 BBS7Q8IWZ6 715 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 CMTM8Q8IZV2 173 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 JPH3Q8WXH2 748 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 ASB11Q8WXH4 323 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 KLHL6Q8WZ60 621 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 BHLHE41Q9C0J9 482 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 NKX2-4Q9H2Z4 354 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 PAQR5Q9NXK6 330 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-201ENST00000221494 CCL26Q9Y258 94 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 DSPPQ9NZW4 1301 aa15.23■□□□□ 0.03
SF3A2-201ENST00000221494 IGLV3-16A0A075B6K0 115 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 GFYI3L273 518 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 TBL1XO60907 577 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 TNFRSF21O75509 655 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PRAMEF12O95522 483 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 POU2F2P09086 479 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 BPIP17213 487 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PTBP1P26599 531 aaKnown RBP eCLIP15.22■□□□□ 0.033e-7■■□□□ 12.2
SF3A2-201ENST00000221494 RPS19P39019 145 aaKnown RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CRISP1P54107 249 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CDH12P55289 794 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 GALK2Q01415 458 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 RIPPLY1Q0D2K3 151 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PTGES3Q15185 160 aaKnown RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CHRNA6Q15825 494 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ZNF630Q2M218 657 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PTCHD3Q3KNS1 767 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CRB2Q5IJ48 1285 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PLEKHS1Q5SXH7 462 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 SLC35F1Q5T1Q4 408 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 GCNT6Q5T4J0 391 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 MBOAT1Q6ZNC8 495 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PTCHD4Q6ZW05 846 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 GRASPQ7Z6J2 395 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 OXR1Q8N573 874 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 HJURPQ8NCD3 748 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 TTC16Q8NEE8 873 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 OR52N2Q8NGI0 321 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 WDR20Q8TBZ3 569 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ZFAND1Q8TCF1 268 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ZC3HAV1LQ96H79 300 aaKnown RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 NEDD4LQ96PU5 975 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 NIPSNAP1Q9BPW8 284 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 MED18Q9BUE0 208 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 TMEM184CQ9NVA4 438 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 DPP7Q9UHL4 492 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ATP6V1HQ9UI12 483 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 SSR3Q9UNL2 185 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 SNX8Q9Y5X2 465 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 A0A1W2PQ09 198 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 H0YIV9 168 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CACNB4O00305 520 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 PROM1O43490 865 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 ADAP00813 363 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 LAMP1P11279 417 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 HLA-EP13747 358 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 RHCEP18577 417 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 CPN2P22792 545 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 NUDT1P36639 197 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 RPL3P39023 403 aaKnown RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 SPIN4Q56A73 249 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 TPGS1Q6ZTW0 290 aa15.22■□□□□ 0.03
SF3A2-201ENST00000221494 METTL3Q86U44 580 aaKnown RBP15.22■□□□□ 0.03
SF3A2-201ENST00000221494 RASGRP3Q8IV61 690 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms