RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TIMP2P16035 220 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 RHCEP18577 417 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 ETV6P41212 452 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 PCBP3P57721 371 aaKnown RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 KRR1Q13601 381 aaKnown RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 DUSP7Q16829 419 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 TOR1AIP1Q5JTV8 583 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 PLAG1Q6DJT9 500 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 FAM71E1Q6IPT2 247 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 C19orf48Q6RUI8 117 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 SLC44A2Q8IWA5 706 aaPredicted RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 TAGAPQ8N103 731 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 MMP21Q8N119 569 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 IL4I1Q96RQ9 567 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CNPPD1Q9BV87 410 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 ANGPT4Q9Y264 503 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CFL2Q9Y281 166 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 DYRK1BQ9Y463 629 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 MN1Q10571 1320 aaPredicted RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 PIPSLA2A3N6 862 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 HIDE1A8MVS5 230 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 WASH3PC4AMC7 463 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 H3BM21 787 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 FOXE1O00358 373 aaPredicted RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 RECKO95980 971 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 SRPRAP08240 638 aaKnown RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 E2F2Q14209 437 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 TIMM50Q3ZCQ8 353 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 LEXMQ3ZCV2 418 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 SPNS1Q9H2V7 528 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 MTG2Q9H4K7 406 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 C11orf16Q9NQ32 467 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 PRRC2BQ5JSZ5 2229 aaKnown RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 MYOFQ9NZM1 2061 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 CDH23Q9H251 3354 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 LOC110117498-PIK3R3F6TDL0 507 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 MPZL2O60487 215 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 SNX4O95219 450 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 APOA1P02647 267 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 IFNW1P05000 195 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 EIF2S1P05198 315 aaKnown RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 C1GALT1C1LP0DN25 315 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 PNLIPRP1P54315 467 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 CCDC149Q6ZUS6 474 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 PSD4Q8NDX1 1056 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 CYB5D2Q8WUJ1 264 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 CAPSLQ8WWF8 208 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 SORCS1Q8WY21 1168 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 PIK3R3Q92569 461 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 TCEAL4Q96EI5 215 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 EXOSC4Q9NPD3 245 aaKnown RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 FBXL12Q9NXK8 326 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
USB1-201ENST00000219281 ENOPH1Q9UHY7 261 aa16.48■□□□□ 0.23
USB1-201ENST00000219281 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 ENTPD6O75354 484 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 KRT75O95678 551 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 ADH1AP07327 375 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 IL3P08700 152 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 CKMT1AP12532 417 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 XPAP23025 273 aaPredicted RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 RPS26P11Q5JNZ5 115 aaPredicted RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 ADIPOR2Q86V24 386 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 LAS2Q8IYD9 372 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 FAM46DQ8NEK8 389 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 IL17RDQ8NFM7 739 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 TRNT1Q96Q11 434 aaKnown RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 SLC30A2Q9BRI3 323 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 SORBS1Q9BX66 1292 aaKnown RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 MYNNQ9NPC7 610 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 KLHL3Q9UH77 587 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 ZNF232Q9UNY5 417 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 TRBV4-1A0A0J9YWV2 114 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 FFAR1O14842 300 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 IGFBP1P08833 259 aaPredicted RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 RPL3P39023 403 aaKnown RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 FEN1P39748 380 aaKnown RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 LIM2P55344 173 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 DSTNP60981 165 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.23
USB1-201ENST00000219281 HIST2H2AA3Q6FI13 130 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 ZNF770Q6IQ21 691 aaPredicted RBP16.47■□□□□ 0.23
USB1-201ENST00000219281 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 CFAP206Q8IYR0 622 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 OR8H2Q8N162 312 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 AP2M1Q96CW1 435 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 EFCAB11Q9BUY7 163 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 TAPBPLQ9BX59 468 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 SLC6A16Q9GZN6 736 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 IL23AQ9NPF7 189 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 WBP1LQ9NX94 342 aa16.47■□□□□ 0.23
USB1-201ENST00000219281 CTSLP07711 333 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 POLR2EP19388 210 aaKnown RBP16.46■□□□□ 0.23
USB1-201ENST00000219281 TNFSF8P32971 234 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 BMPR1AP36894 532 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 SOX3P41225 446 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms