RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CCBE1Q6UXH8 406 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 LIPIQ6XZB0 460 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 GDPGP1Q6ZNW5 385 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 GDPD3Q7L5L3 318 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 LRRC56Q8IYG6 542 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 GALNT6Q8NCL4 622 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 MRGPRX3Q96LB0 322 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SLC30A2Q9BRI3 323 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 ZCCHC2Q9C0B9 1178 aaKnown RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 ROGDIQ9GZN7 287 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SIAEQ9HAT2 523 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 A4GALTQ9NPC4 353 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 MIEF1Q9NQG6 463 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 NPAP1Q9NZP6 1156 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SPATA7Q9P0W8 599 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TRAPPC4Q9Y296 219 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 PDZK1P1A8MUH7 402 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 PSMD11O00231 422 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 OXSR1O95747 527 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 C8AP07357 584 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 IL3P08700 152 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 ADRA2AP08913 450 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 OSMP13725 252 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 ENDOUP21128 410 aaKnown RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 CD72P21854 359 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
SRP54-201ENST00000216774 CASP3P42574 277 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TAP2Q03519 686 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 NOGQ13253 232 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SSX1Q16384 188 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 DUSP7Q16829 419 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 PRSS53Q2L4Q9 553 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 UCK2Q9BZX2 261 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SLC6A16Q9GZN6 736 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 CCDC177Q9NQR7 707 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 DYRK4Q9NR20 520 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 SPHK2Q9NRA0 654 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TMCC3Q9ULS5 477 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TLR4O00206 839 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CACNB4O00305 520 aaPredicted RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 FFAR1O14842 300 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 DNTTP04053 509 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 PPM1AP35813 382 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 ILKQ13418 452 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 TSTA3Q13630 321 aaPredicted RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.38
SRP54-201ENST00000216774 LILRA6Q6PI73 481 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 TRIM69Q86WT6 500 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 NATD1Q8N6N6 113 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 NEURL3Q96EH8 262 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CEP19Q96LK0 163 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 OPALINQ96PE5 141 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 HOXD1Q9GZZ0 328 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 TAAR2Q9P1P5 351 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 REV1Q9UBZ9 1251 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 POU2F3Q9UKI9 436 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 MGAT4BQ9UQ53 548 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 WBP11Q9Y2W2 641 aaKnown RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 LILRB5O75023 590 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 ENTPD6O75354 484 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 GPX5O75715 221 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 POU1F1P28069 291 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 IRS1P35568 1242 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 LIM2P55344 173 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 IER5LQ5T953 404 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 RNLSQ5VYX0 342 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CEACAM20Q6UY09 585 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 ANKRD33Q7Z3H0 272 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 NLGN4XQ8N0W4 816 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 IL17RCQ8NAC3 791 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 SETD6Q8TBK2 473 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 MYLIPQ8WY64 445 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 KLHL6Q8WZ60 621 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 SDHCQ99643 169 aaPredicted RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CXorf36Q9H7Y0 433 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 AHSPQ9NZD4 102 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 RHCGQ9UBD6 479 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 KLHL3Q9UH77 587 aa12.68□□□□□ -0.38
SRP54-201ENST00000216774 CAB39Q9Y376 341 aaPredicted RBP12.68□□□□□ -0.38
SRP54-201ENST00000216774 TRBV4-1A0A0J9YWV2 114 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 FAAHO00519 579 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 PI15O43692 258 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SYN1P17600 705 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.38
SRP54-201ENST00000216774 CA8P35219 290 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 CCR2P41597 374 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 MEF2AQ02078 507 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms