RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TRIM64A6NGJ6 449 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC22A2O15244 555 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 BMP1P13497 986 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 CD9P21926 228 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 UPP1Q16831 310 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 NPWQ8N729 165 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 TMIGD2Q96BF3 282 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
TGFBR3-201ENST00000212355 DUXAA6NLW8 204 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 YY2O15391 372 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 PON3Q15166 354 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 SGCAQ16586 387 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 TMEM126BQ8IUX1 230 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 GPALPP1Q8IXQ4 340 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 HS3ST5Q8IZT8 346 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 OR6N1Q8NGY5 312 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 CPNE2Q96FN4 548 aaPredicted RBP13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.312e-7■■■■□ 19.3
TGFBR3-201ENST00000212355 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 NCDNQ9UBB6 729 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 DKKL1Q9UK85 242 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 ITGB1BP2Q9UKP3 347 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 KCNS2Q9ULS6 477 aa13.08□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 KCNJ13O60928 360 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 GTF2F2P13984 249 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SSTR4P31391 388 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 RPP38P78345 283 aaKnown RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 EMX2Q04743 252 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SMIM14Q96QK8 99 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 YES1P07947 543 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 APEHP13798 732 aaKnown RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 ETFAP13804 333 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 FPR1P21462 350 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 NCS1P62166 190 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 MOGSQ13724 837 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 GXYLT1Q4G148 440 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 RNF175Q8N4F7 328 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 NDNFQ8TB73 568 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 THAP6Q8TBB0 222 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 ACDQ96AP0 544 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 FOXN4Q96NZ1 517 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 OR2S2Q9NQN1 319 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 HRASLS2Q9NWW9 162 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 A6NIN4 97 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 EBLN1P0CF75 366 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 GTDC1Q4AE62 458 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 ZNF789Q5FWF6 425 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 MINDY2Q8NBR6 621 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 IGLON5A6NGN9 336 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 HCRTR2O43614 444 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 ACRV1P26436 265 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 GNG2P59768 71 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 AKAP1Q92667 903 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■■■■■ 33.6
TGFBR3-201ENST00000212355 SLCO2A1Q92959 643 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 SLC5A7Q9GZV3 580 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 HCN2Q9UL51 889 aa13.08□□□□□ -0.32
TGFBR3-201ENST00000212355 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TEX46H3BTG2 121 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 DPY19L1Q2PZI1 675 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 LRRC69Q6ZNQ3 347 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 C2orf15Q8WU43 125 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 GPR39O43194 453 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TBPL1P62380 186 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 NUP43Q8NFH3 380 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 TBC1D15Q8TC07 691 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 GNPDA2Q8TDQ7 276 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 HSPA12BQ96MM6 686 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 BTBD1Q9H0C5 482 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 LRRC42Q9Y546 428 aa13.07□□□□□ -0.32
TGFBR3-201ENST00000212355 PIGRP01833 764 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms