RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Trim16Q99PP9 556 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Pgm1Q9D0F9 562 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 4930513O06RikQ9D549 161 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 EqtnQ9D9V2 337 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Prl8a8Q9DAS4 241 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Lima1Q9ERG0 753 aaKnown RBP13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Morf4l2Q9R0Q4 288 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Cacna1bO55017 2327 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Smok3cA0A087WSF2 504 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr1200A2ATJ4 336 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr1095A3KPP7 308 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ankle1A8VU90 534 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Zfp946F6VWU8 523 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Polr2jO08740 117 aaKnown RBP13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Galr3O88853 370 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mtnd2P03893 345 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Htr3aP23979 487 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Slc6a12P31651 614 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Serpind1P49182 478 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 StarP51557 284 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Nup43P59235 380 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Dusp5Q1HL35 384 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 TraddQ3U0V2 310 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mapkapk3Q3UMW7 384 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Fam71bQ5STT6 665 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Il12rb1Q60837 738 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Map4k2Q61161 821 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Doxl2Q6IMK7 723 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Plekha6Q7TQG1 1173 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Znf516Q7TSH3 1157 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Kcmf1Q80UY2 381 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Arl15Q8BGR6 204 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Prdm8Q8BZ97 687 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Bbs4Q8C1Z7 520 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Arel1Q8CHG5 823 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Polr1eQ8K202 482 aaKnown RBP13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 CthQ8VCN5 398 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr97Q8VFE1 310 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr551Q8VG23 315 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr380Q8VGT3 311 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Zkscan3Q91VW9 553 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 SharpinQ91WA6 380 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Abhd17aQ99JW1 310 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Yipf2Q99LP8 312 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 D730048I06RikQ9CQB8 106 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Snrpb2Q9CQI7 225 aaKnown RBP13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ankrd61Q9CQM6 421 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Atp13a2Q9CTG6 1169 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Subh2bvQ9D9Z7 123 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Wdr53Q9DB94 358 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mllt1Q9ERL0 547 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 HrgQ9ESB3 525 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Arpc3Q9JM76 178 aaKnown RBP13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Itgb6Q9Z0T9 787 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Uba2Q9Z1F9 638 aa13.94□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Prrt4B2RU40 902 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Zfp938E9Q9G3 579 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 CgaP01216 120 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 P01629 112 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Sat1P48026 171 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Hnrnph2P70333 449 aaKnown RBP13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ankdd1bQ14DN9 521 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Srsf6Q3TWW8 339 aaKnown RBP13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Arhgap17Q3UIA2 846 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Cyb5d2Q5SSH8 263 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Trpc1Q61056 793 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Sdc3Q64519 442 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Grm7Q68ED2 915 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Chst14Q80V53 376 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mup21Q80YX8 181 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Slc25a40Q8BGP6 337 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Cpne3Q8BT60 533 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Atp6v1hQ8BVE3 483 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Dzank1Q8C008 778 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Gpr157Q8C206 330 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Hmgcs1Q8JZK9 520 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Colec12Q8K4Q8 742 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr570Q8VH12 312 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Acsl6Q91WC3 697 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 OoepQ9CWE6 164 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 TescQ9JKL5 214 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Chst11Q9JME2 352 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Hao1Q9WU19 370 aa13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 MgaA2AWL7 3003 aaKnown RBP13.93□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Dock8Q8C147 2100 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Igkv9-123A0A140T8N8 117 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Cd300ld2A2A7W0 305 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Fam84bD3YXJ5 310 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Gm20721E9Q2U8 318 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Gm2832F7AEC7 200 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Gm7535F7CXE4 302 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Unc5cO08747 931 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 CflarO35732 481 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Defb43Q30KM9 69 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tmem173Q3TBT3 378 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 TepsinQ3U3N6 573 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Cdk15Q3V3A1 433 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Bcl2a1bQ497M6 172 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mapre3Q6PER3 281 aa13.92□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Methig1Q76I26 264 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms