RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 ZNF764Q96H86 408 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 MAP3K3Q99759 626 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TACO1Q9BSH4 297 aaKnown RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 FAIM2Q9BWQ8 316 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 RPF2Q9H7B2 306 aaKnown RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 COPS7BQ9H9Q2 264 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 SLAMF7Q9NQ25 335 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 FSCN3Q9NQT6 498 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 ZNF282Q9UDV7 671 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 FBXO4Q9UKT5 387 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 FBXW2Q9UKT8 454 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 GPX2P18283 190 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 ALDH4A1P30038 563 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 SLC7A1P30825 629 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TNIP2Q8NFZ5 429 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 PNPT1Q8TCS8 783 aaKnown RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 CANT1Q8WVQ1 401 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 ZC3H10Q96K80 434 aaKnown RBP17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TRIM4Q9C037 500 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 C1GALT1Q9NS00 363 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TAS2R9Q9NYW1 312 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TAS2R7Q9NYW3 318 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 AP4S1Q9Y587 144 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 GMEB1Q9Y692 573 aa17.3■□□□□ 0.36
PHGDH-209ENST00000641074 TCRBV5S2A0A599 114 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 URADA6NGE7 173 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 WASHC1A8K0Z3 465 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 PDPK1O15530 556 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 KIF1CO43896 1103 aaKnown RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 GUCY1B2O75343 617 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 DDX5P17844 614 aaKnown RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 PPM1FP49593 454 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 EPHA4P54764 986 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 PCBP4P57723 403 aaKnown RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 NKAIN2Q5VXU1 208 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 CEP68Q76N32 757 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 SERPINA11Q86U17 422 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 MICU2Q8IYU8 434 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 PQLC1Q8N2U9 271 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 NATD1Q8N6N6 113 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 REXO5Q96IC2 774 aaKnown RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 EHD3Q9NZN3 535 aa17.29■□□□□ 0.36
PHGDH-209ENST00000641074 MRPS2Q9Y399 296 aaKnown RBP17.29■□□□□ 0.36
PHGDH-209ENST00000641074 DHRS12A0PJE2 317 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GLOD5A6NK44 160 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GSTA4O15217 222 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 ZSCAN9O15535 394 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 NUDT21O43809 227 aaKnown RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 AIFM1O95831 613 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 MYF5P13349 255 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 EPHA8P29322 1005 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 VHLP40337 213 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PI4KAP42356 2102 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 FRKP42685 505 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GFERP55789 205 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 VSX2P58304 361 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 SUZ12Q15022 739 aaKnown RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 DEFB110Q30KQ9 67 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 DEFB134Q4QY38 66 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 MANEAQ5SRI9 462 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 C18orf63Q68DL7 685 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 LILRA2Q8N149 483 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 CSNK1A1LQ8N752 337 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GOLM1Q8NBJ4 401 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 FIG4Q92562 907 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 NSMCE2Q96MF7 247 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 TGM7Q96PF1 710 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 MAPKAP1Q9BPZ7 522 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 ROGDIQ9GZN7 287 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 LYARQ9NX58 379 aaKnown RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 C6orf203Q9P0P8 240 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 CABIN1Q9Y6J0 2220 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 A0A1B0GTQ1 180 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PGRMC2O15173 223 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PROM1O43490 865 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 NTRK1P04629 796 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PPIBP23284 216 aaKnown RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 OR1D5P58170 312 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 COL9A2Q14055 689 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 CYP51A1Q16850 503 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 HLA-BQ31612 363 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PEAR1Q5VY43 1037 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 TMEM214Q6NUQ4 689 aaKnown RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 ABHD13Q7L211 337 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 KANSL1Q7Z3B3 1105 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GATAD2AQ86YP4 633 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 ADGRG5Q8IZF4 528 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 ZNF655Q8N720 491 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-209ENST00000641074 TRIML2Q8N7C3 387 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 FAM110BQ8TC76 370 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 OR5P2Q8WZ92 322 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 NCSTNQ92542 709 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 SERINC2Q96SA4 455 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 PKP2Q99959 881 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 CCDC3Q9BQI4 270 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 SLC35A5Q9BS91 424 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
PHGDH-209ENST00000641074 GORASP2Q9H8Y8 452 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms