RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C16orf78Q8WTQ4 265 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 EXOSC8Q96B26 276 aaKnown RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 DMRTB1Q96MA1 342 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 HHIPQ96QV1 700 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 TAS2R9Q9NYW1 312 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 RFXAPO00287 272 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ENTPD6O75354 484 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 APOA1P02647 267 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ALPPL2P10696 532 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 TIMP2P16035 220 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 NPPBP16860 134 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 DOC2BQ14184 412 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 TEAD2Q15562 447 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ADCK2Q7Z695 626 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 TBC1D20Q96BZ9 403 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PIP5K1AQ99755 562 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 CLN6Q9NWW5 311 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 EFCAB10A6NFE3 127 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 EIF3FO00303 357 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 RNASET2O00584 256 aaKnown RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 CCNKO75909 580 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 OLFM2O95897 454 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 MANFP55145 182 aaKnown RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 NTHL1P78549 312 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 NFE2L1Q14494 772 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PAQR6Q6TCH4 344 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 OR52N2Q8NGI0 321 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 GEMIN6Q8WXD5 167 aaKnown RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 EHD1Q9H4M9 534 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 ARHGAP33O14559 1287 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TNFRSF21O75509 655 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ITGA2P17301 1181 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 PTNP21246 168 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TCEA1P23193 301 aaKnown RBP13.94□□□□□ -0.18
SCARB2-221ENST00000640341 UGT2B15P54855 530 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TLE2Q04725 743 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TCEA2Q15560 299 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ZMAT1Q5H9K5 638 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TTC23LQ6PF05 361 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 BRAT1Q6PJG6 821 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 YIPF4Q9BSR8 244 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ZSCAN5AQ9BUG6 496 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 NLNQ9BYT8 704 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 KLHL42Q9P2K6 505 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TMCC3Q9ULS5 477 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 WASHC1A8K0Z3 465 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 FURINP09958 794 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ACRP10323 421 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 CSNK2BP67870 215 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 WASH2PQ6VEQ5 465 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 GDPD3Q7L5L3 318 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 WDR53Q7Z5U6 358 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-221ENST00000640341 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 CPEB1Q9BZB8 566 aaKnown RBP13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TIGARQ9NQ88 270 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TRPC4Q9UBN4 977 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 TMEM98Q9Y2Y6 226 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 SNX11Q9Y5W9 270 aa13.94□□□□□ -0.18
SCARB2-221ENST00000640341 FEZF1A0PJY2 475 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 TTC36A6NLP5 189 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 UGDHO60701 494 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 DSTNP60981 165 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 MPP7Q5T2T1 576 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 HENMT1Q5T8I9 393 aaKnown RBP13.93□□□□□ -0.18
SCARB2-221ENST00000640341 CPXM2Q8N436 756 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 TCEANCQ8N8B7 351 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 COQ8BQ96D53 544 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 SIGLEC11Q96RL6 698 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 PSD2Q9BQI7 771 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 DMRT3Q9NQL9 472 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 TVP23BQ9NYZ1 205 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 PDZK1P1A8MUH7 402 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 AP3D1O14617 1153 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 LRRTM2O43300 516 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 C1orf105O95561 183 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 CXCL14O95715 111 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 CRISP1P54107 249 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 DEFA1P59665 94 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 DEFA3P59666 94 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 TARDBPQ13148 414 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCARB2-221ENST00000640341 ZNF362Q5T0B9 420 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-221ENST00000640341 LIPKQ5VXJ0 399 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 FRMPD2BQ6IN97 320 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 GPR155Q7Z3F1 870 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 ADIPOR2Q86V24 386 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 OXR1Q8N573 874 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 KREMEN2Q8NCW0 462 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 XAGE5Q8WWM1 108 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 IRF7Q92985 503 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 F2RL3Q96RI0 385 aa13.93□□□□□ -0.18
SCARB2-221ENST00000640341 CXorf36Q9H7Y0 433 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms