RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NPIPB15A6NHN6 443 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 MCIDASD6RGH6 385 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 RFPL2O75678 378 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 CD9P21926 228 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 STARP49675 285 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 SEC13P55735 322 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 SLC35F1Q5T1Q4 408 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 LINGO2Q7L985 606 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 TMC8Q8IU68 726 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 GPR78Q96P69 363 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 GAL3ST1Q99999 423 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 C11orf84Q9BUA3 381 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 RAB11FIP5Q9BXF6 653 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 CARS2Q9HA77 564 aaKnown RBP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 DDX6P26196 483 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 EMX1Q04741 257 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 MFSD6LQ8IWD5 586 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 SUN5Q8TC36 379 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 GRHL3Q8TE85 626 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-210ENST00000638567 RIPOR3Q96MK2 946 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 ARAP2Q8WZ64 1704 aa15.99■□□□□ 0.15
SCARB2-210ENST00000638567 NUP205Q92621 2012 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 FAM25EA8MYX2 175 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 E2F3O00716 465 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 AOC2O75106 756 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 ALPLP05186 524 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 RPS3P23396 243 aaKnown RBP eCLIP15.98■□□□□ 0.151e-6■■■■■ 29.8
SCARB2-210ENST00000638567 IGFBP6P24592 240 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 BTN3A2P78410 334 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 PAPD5Q8NDF8 572 aaKnown RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 GPR26Q8NDV2 337 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 S100A13Q99584 98 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 SMURF1Q9HCE7 757 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 HSPB11Q9Y547 144 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 PCDHGB5Q9Y5G0 923 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 KRBA1A5PL33 1030 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 CLCA1A8K7I4 914 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 MORN1Q5T089 497 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 TRAM1L1Q8N609 369 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 OR5P2Q8WZ92 322 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 F2RL3Q96RI0 385 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 KLHL31Q9H511 634 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 RAB36O95755 333 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 CNR2P34972 360 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 ERVK-21P61565 698 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 ZNF805Q5CZA5 627 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 CCDC116Q8IYX3 515 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 KLHDC9Q8NEP7 349 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 OR9Q2Q8NGE9 314 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 KCNN1Q92952 543 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 RELTQ969Z4 430 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 TTYH1Q9H313 450 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 SACM1LQ9NTJ5 587 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 NFKBIL1Q9UBC1 381 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 CD300AQ9UGN4 299 aa15.98■□□□□ 0.15
SCARB2-210ENST00000638567 MARF1Q9Y4F3 1742 aaKnown RBP15.98■□□□□ 0.15
SCARB2-210ENST00000638567 RHCEP18577 417 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 AP3S2P59780 193 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 CTSL3PQ5NE16 218 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 C22orf42Q6IC83 251 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 TMEM53Q6P2H8 277 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 Q6ZSR9 355 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 LHFPL3Q86UP9 236 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SNX29P2Q8IUI4 249 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 LINC01465Q8N7H1 131 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 RNF38Q9H0F5 515 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 DPEP2Q9H4A9 486 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 PGAP2Q9UHJ9 254 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 AP1G1O43747 822 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 HSF2Q03933 536 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 COMMD6Q7Z4G1 85 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 FAM217AQ8IXS0 508 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 OR8H3Q8N146 312 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 CHST14Q8NCH0 376 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 TSEN15Q8WW01 171 aaKnown RBP15.97■□□□□ 0.15
SCARB2-210ENST00000638567 CLCA3PQ9Y6N3 262 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 HHLA1C9JL84 531 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 J3QLW9 94 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 XKRYO14609 159 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 ZNF19P17023 458 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 C2orf27AQ580R0 203 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 HMBOX1Q6NT76 420 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SLC27A4Q6P1M0 643 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 FAM180AQ6UWF9 173 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SLC36A4Q6YBV0 504 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 C6orf120Q7Z4R8 191 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SPRED1Q7Z699 444 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SLC37A3Q8NCC5 494 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 OR7G3Q8NG95 312 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 OR51G2Q8NGK0 314 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SPATA9Q9BWV2 254 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 XKR8Q9H6D3 395 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 NME7Q9Y5B8 376 aa15.97■□□□□ 0.15
SCARB2-210ENST00000638567 SLX4Q8IY92 1834 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms