RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NATD1Q8N6N6 113 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 OR1L3Q8NH93 324 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CEP70Q8NHQ1 597 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ACTRT2Q8TDY3 377 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 UTP15Q8TED0 518 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 MTERF3Q96E29 417 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 C10orf90Q96M02 699 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SLC46A1Q96NT5 459 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 MTERF1Q99551 399 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CCDC28BQ9BUN5 200 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ULBP3Q9BZM4 244 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 C20orf27Q9GZN8 174 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 DDX31Q9H8H2 851 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 WDR54Q9H977 334 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 WDR41Q9HAD4 459 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 IRAK4Q9NWZ3 460 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 OCIAD1Q9NX40 245 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 EHD3Q9NZN3 535 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 KLHL14Q9P2G3 628 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PISDQ9UG56 409 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SLC12A4Q9UP95 1085 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 TRIM33Q9UPN9 1127 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SATB2Q9UPW6 733 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 WASF3Q9UPY6 502 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CCL27Q9Y4X3 112 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 USH1CQ9Y6N9 552 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SEC16AO15027 2179 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 LOC105369274A0A096LPK9 316 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 A0A0A6YYD5 115 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 LOC102723532A0A0G2JNH3 316 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 DYTNA2CJ06 578 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 GMNCA6NCL1 334 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TCP11X1B4DZS4 312 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 C9J4A7 227 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SLC22A2O15244 555 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 P2RX6O15547 441 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF749O43361 778 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 B3GALT2O43825 422 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 NRP2O60462 931 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TBX19O60806 448 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SKAP2O75563 359 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 STK17BO94768 372 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TBX6O95947 436 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 FAM107AO95990 144 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TGFB1P01137 390 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 VIMP08670 466 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 IFI6P09912 130 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 RAB40ALP0C0E4 278 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 LIPCP11150 499 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SPTBP11277 2137 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 RNH1P13489 461 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 IDO1P14902 403 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 LBPP18428 481 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 FSTP19883 344 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ADSLP30566 484 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TIA1P31483 386 aaKnown RBP eCLIP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 HNRNPH1P31943 449 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 BUD31P41223 144 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 HTR6P50406 440 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ATP4BP51164 291 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 RAB38P57729 211 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 CYP4F2P78329 520 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 DCDP81605 110 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 EMX2Q04743 252 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 BTKQ06187 659 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 LRRC74AQ0VAA2 488 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TBL3Q12788 808 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 DDX39BQ13838 428 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 KCNAB1Q14722 419 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SLC9A5Q14940 896 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 HEPACAMQ14CZ8 416 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ABRAXAS2Q15018 415 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 PDCD2Q16342 344 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 DEFB110Q30KQ9 67 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TOR1AIP1Q5JTV8 583 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 MRM1Q6IN84 353 aaKnown RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 PWWP2BQ6NUJ5 590 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 EPGNQ6UW88 154 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 FAM47EQ6ZV65 393 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 COMMD6Q7Z4G1 85 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SPATA19Q7Z5L4 167 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 WFDC8Q8IUA0 241 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 PLD3Q8IV08 490 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 FAM20CQ8IXL6 584 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 DSELQ8IZU8 1212 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 NLGN4XQ8N0W4 816 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 OR4N4Q8N0Y3 316 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 NLGN4YQ8NFZ3 816 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 CHTF18Q8WVB6 975 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 PRR11Q96HE9 360 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 VPS50Q96JG6 964 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 GBP5Q96PP8 586 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 FAIM2Q9BWQ8 316 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF717Q9BY31 904 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SPRY4Q9C004 299 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TUBB1Q9H4B7 451 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms