RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TECPR1Q7Z6L1 1165 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LUZP2Q86TE4 346 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SLC51BQ86UW2 128 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ADIPOR2Q86V24 386 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PAQR7Q86WK9 346 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 VRK2Q86Y07 508 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ARID3BQ8IVW6 561 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CHERPQ8IWX8 916 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LRRC75A-AS1Q8N1F1 130 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ARFGAP1Q8N6T3 406 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 AMER3Q8N944 861 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KBTBD3Q8NAB2 608 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 C11orf65Q8NCR3 313 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF397Q8NF99 534 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 OR4N2Q8NGD1 307 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GPX8Q8TED1 209 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM170AQ8WVE7 144 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FAR1Q8WVX9 515 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 IRGQQ8WZA9 623 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TRIB2Q92519 343 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PIGBQ92521 554 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CNOT9Q92600 299 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SLC25A28Q96A46 364 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SPSB1Q96BD6 273 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ULK4Q96C45 1275 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 BSCL2Q96G97 398 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TAAR6Q96RI8 345 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SIGLEC11Q96RL6 698 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SH2D3AQ9BRG2 576 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM175Q9BSA9 504 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 WACQ9BTA9 647 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ALG12Q9BV10 488 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 C1QTNF1Q9BXJ1 281 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MRPL13Q9BYD1 178 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 IFIH1Q9BYX4 1025 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NAPBQ9H115 298 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MMP27Q9H306 513 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM245Q9H330 911 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ASB8Q9H765 288 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ATP13A3Q9H7F0 1226 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM185BQ9H7F4 350 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 COG4Q9H9E3 785 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MAGEF1Q9HAY2 307 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 VAT1LQ9HCJ6 419 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 APMAPQ9HDC9 416 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MKKSQ9NPJ1 570 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FAM207AQ9NSI2 230 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SLCO1C1Q9NYB5 712 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KLHL13Q9P2N7 655 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ONECUT1Q9UBC0 465 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 DNAJB4Q9UDY4 337 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 APOBEC3BQ9UH17 382 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF229Q9UJW7 825 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GGA2Q9UJY4 613 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CDH9Q9ULB4 789 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TBC1D24Q9ULP9 559 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PAIP2BQ9ULR5 123 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LAMP3Q9UQV4 416 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MRPS33Q9Y291 106 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CMAHPQ9Y471 501 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NFE2L3Q9Y4A8 694 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LRRC42Q9Y546 428 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.79□□□□□ -1.966e-24■■■■□ 20.4
PSPC1-208ENST00000635562 CACNG2Q9Y698 323 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ZHX2Q9Y6X8 837 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FHOD3Q2V2M9 1422 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 CPDO75976 1380 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 SF3B1O75533 1304 aaKnown RBP eCLIP2.78□□□□□ -1.962e-6■■■■■ 81
PSPC1-208ENST00000635562 CDHR2Q9BYE9 1310 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 CNTNAP2Q9UHC6 1331 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 A0A0B4J293 547 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1B0GUH1 482 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1W2PQ72 361 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 MACROD2A1Z1Q3 448 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 MBLAC1A4D2B0 266 aaPredicted RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 PDZK1P1A8MUH7 402 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 E7ENQ6 273 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 INSIG1O15503 277 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 NDUFS4O43181 175 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 RNF13O43567 381 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 SCN2BO60939 215 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 GPX5O75715 221 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 RPP14O95059 124 aaKnown RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 MOCS3O95396 460 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 NFATC1O95644 943 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 BCL10O95999 233 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 MBP02144 154 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 ICAM1P05362 532 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 CD63P08962 238 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM191BP0C7N4 346 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 UBTFL1P0CB47 393 aaPredicted RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 TNNI3P19429 210 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF10P21506 573 aaPredicted RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 HOXD9P28356 352 aaPredicted RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 MPGP29372 298 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 CD40LGP29965 261 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 YWHABP31946 246 aaKnown RBP2.78□□□□□ -1.96
PSPC1-208ENST00000635562 DCTDP32321 178 aa2.78□□□□□ -1.96
PSPC1-208ENST00000635562 CD80P33681 288 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms