RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GMEB1Q9Y692 573 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ABCB7O75027 752 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF623O75123 536 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 KCNC1P48547 511 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SHQ1Q6PI26 577 aaKnown RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF773Q6PK81 442 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 KBTBD6Q86V97 674 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FUZQ9BT04 418 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 LTN1O94822 1766 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FCER2P06734 321 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 HRH2P25021 359 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SEC23BQ15437 767 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 C7orf57Q8NEG2 295 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 NSMAFQ92636 917 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CCDC120Q96HB5 630 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 SAMD11Q96NU1 681 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 OR6C70A6NIJ9 312 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 HTRA2O43464 458 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FAM189A1O60320 539 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 DFNA5O60443 496 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 CLIC3O95833 236 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 IQCF3P0C7M6 154 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 UNC50Q53HI1 259 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 OR6N2Q8NGY6 317 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 S100A16Q96FQ6 103 aaKnown RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 WACQ9BTA9 647 aa12.32□□□□□ -0.44
SCN8A-209ENST00000627620 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-209ENST00000627620 HCRTR2O43614 444 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 VEGFDO43915 354 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CAPZA1P52907 286 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CLRN1P58418 232 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 TBPL1P62380 186 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 SLAMF1Q13291 335 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF565Q8N9K5 539 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 NUP43Q8NFH3 380 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 WDR77Q9BQA1 342 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CMAHPQ9Y471 501 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 HEPACAM2A8MVW5 462 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 OAZ2O95190 189 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 PER3P56645 1201 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 DEFB134Q4QY38 66 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 MEDAGQ5VYS4 303 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 TMED4Q7Z7H5 227 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 IL17FQ96PD4 163 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 PTBP2Q9UKA9 531 aaKnown RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 OR7A10O76100 309 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 KDM4BO94953 1096 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 S100A10P60903 97 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 C1orf61Q13536 156 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ZSCAN4Q8NAM6 433 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM41AQ96HV5 264 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 FARSAQ9Y285 508 aaKnown RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 SLC35E2BP0CK96 405 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 BCKDHAP12694 445 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 EDNRBP24530 442 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 RAB15P59190 212 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CD83Q01151 205 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ATP6AP1Q15904 470 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM225Q6GV28 225 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 SLC7A6OSQ96CW6 309 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 MVB12BQ9H7P6 319 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 MEAF6Q9HAF1 191 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 PCDHGB6Q9Y5F9 930 aa12.31□□□□□ -0.44
SCN8A-209ENST00000627620 CICQ96RK0 1608 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-209ENST00000627620 FXYD6-FXYD2A0A087WZ82 144 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 MYOCOSA0A1B0GUC4 107 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SH3D21A4FU49 640 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 RNF144AP50876 292 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 CDKN2DP55273 166 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SORCS1Q8WY21 1168 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms