RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ARMC10Q8N2F6 343 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 TEX9Q8N6V9 391 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 FAM47BQ8NA70 645 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 FAM98AQ8NCA5 519 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM52Q8NDY8 209 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 OR7G3Q8NG95 312 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 IFT81Q8WYA0 676 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 RELTQ969Z4 430 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SCMH1Q96GD3 660 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 MS4A8Q9BY19 250 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 FUT8Q9BYC5 575 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 TRIM45Q9H8W5 580 aaPredicted RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 ADGRE2Q9UHX3 823 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 DMGDHQ9UI17 866 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 PPIEQ9UNP9 301 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CLDN16Q9Y5I7 305 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SPACA6W5XKT8 324 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 FLNCQ14315 2725 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TRGV8A0A0C4DH27 118 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TRBV11-1A0A0K0K1C0 115 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ASPDHA6ND91 283 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 KLK8O60259 260 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TGFB1P01137 390 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ALDOAP04075 364 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 IFNA16P05015 189 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 INHBAP08476 426 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ATP5A1P25705 553 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TRHRP34981 398 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 PIK3CBP42338 1070 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 SERPINB8P50452 374 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 HLCSP50747 726 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 HNRNPFP52597 415 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ALDH18A1P54886 795 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ALDH6A1Q02252 535 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 STX4Q12846 297 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 SETDB1Q15047 1291 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 MAPKAPK3Q16644 382 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 KRTCAP3Q53RY4 240 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF468Q5VIY5 522 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 C1QL3Q5VWW1 255 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 LIPJQ5W064 366 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 GRHL2Q6ISB3 625 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 GALNTL5Q7Z4T8 443 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CLNKQ7Z7G1 428 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 FJX1Q86VR8 437 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 MYLK4Q86YV6 388 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM132CQ8N3T6 1108 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ACOT4Q8N9L9 421 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 APCDD1LQ8NCL9 501 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 C7orf57Q8NEG2 295 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM125Q96AQ2 219 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CMTM7Q96FZ5 175 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 VMP1Q96GC9 406 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CSF3RQ99062 836 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CCDC77Q9BR77 488 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 HES7Q9BYE0 225 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ALOXE3Q9BYJ1 711 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 VPS11Q9H270 941 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 CDC42EP4Q9H3Q1 356 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ACTR8Q9H981 624 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 LYRM4Q9HD34 91 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 ADAP2Q9NPF8 381 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 KCMF1Q9P0J7 381 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 FBXW2Q9UKT8 454 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TNPO3Q9Y5L0 923 aaKnown RBP10.12□□□□□ -0.79
SSBP4-215ENST00000625926 IKBKGQ9Y6K9 419 aa10.12□□□□□ -0.79
SSBP4-215ENST00000625926 TGFBR3LH3BV60 316 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 RTCAO00442 366 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SH3BGRLO75368 114 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SNRNP200O75643 2136 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SLC25A12O75746 678 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 ZFAND5O76080 213 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SCELO95171 688 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 ACSL3O95573 720 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 RBP1P09455 135 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 TNNI3P19429 210 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 HIST1H1TP22492 207 aaPredicted RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 PPP2R1BP30154 601 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 PIK3CGP48736 1102 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SERPINB9P50453 376 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 GPR143P51810 404 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SERTAD2Q14140 314 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.798e-8■■■■■ 32.6
SSBP4-215ENST00000625926 ZRSR2Q15696 482 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 ELAVL1Q15717 326 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 DEPDC1Q5TB30 811 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 KHDRBS2Q5VWX1 349 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 OR4C11Q6IEV9 310 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 METTL2BQ6P1Q9 378 aaKnown RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF793Q6ZN11 406 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM156Q8N614 296 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 HUS1BQ8NHY5 278 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 THAP3Q8WTV1 239 aaPredicted RBP10.11□□□□□ -0.79
SSBP4-215ENST00000625926 SLC44A1Q8WWI5 657 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 DAZLQ92904 295 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms