RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 GCAP28676 217 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 LIM2P55344 173 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 RUNX2Q13950 521 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 UBAP2LQ14157 1087 aaKnown RBP11.66□□□□□ -0.54
LINC00963-217ENST00000624009 AP5B1Q2VPB7 878 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 GOLGA7Q7Z5G4 137 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 UBE3DQ7Z6J8 389 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 SHISA5Q8N114 240 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 ZCCHC7Q8N3Z6 543 aaKnown RBP11.66□□□□□ -0.54
LINC00963-217ENST00000624009 HORMAD2Q8N7B1 307 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 MYRIPQ8NFW9 859 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 DNAJB8Q8NHS0 232 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 HUS1BQ8NHY5 278 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 FAR1Q8WVX9 515 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 RGMAQ96B86 450 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 RHOXF2Q9BQY4 288 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 RBCK1Q9BYM8 510 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 TRIM45Q9H8W5 580 aaPredicted RBP11.66□□□□□ -0.54
LINC00963-217ENST00000624009 KCNK13Q9HB14 408 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 ADAP2Q9NPF8 381 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 ASF1BQ9NVP2 202 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 CPSF2Q9P2I0 782 aaKnown RBP11.66□□□□□ -0.54
LINC00963-217ENST00000624009 PSMC3IPQ9P2W1 217 aaPredicted RBP11.66□□□□□ -0.54
LINC00963-217ENST00000624009 XPR1Q9UBH6 696 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 CLDN16Q9Y5I7 305 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 CSAG2Q9Y5P2 127 aa11.66□□□□□ -0.54
LINC00963-217ENST00000624009 IGHV3-20A0A0C4DH32 117 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 SEMA3DO95025 777 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 CBX6O95503 412 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 WDPCPO95876 746 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 UQCRHP07919 91 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 CELA2AP08217 269 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 RPS17P08708 135 aaKnown RBP11.65□□□□□ -0.54
LINC00963-217ENST00000624009 MAOAP21397 527 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 CERS1P27544 350 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 NAA20P61599 178 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 BTG2P78543 158 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ZNF33BQ06732 778 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 SERTAD2Q14140 314 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 SLC29A2Q14542 456 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ELAVL1Q15717 326 aaKnown RBP11.65□□□□□ -0.54
LINC00963-217ENST00000624009 COLEC12Q5KU26 742 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 OR4C11Q6IEV9 310 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ADNP2Q6IQ32 1131 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 TMEM151AQ8N4L1 468 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 CISD2Q8N5K1 135 aaKnown RBP11.65□□□□□ -0.54
LINC00963-217ENST00000624009 BCORP1Q8N888 145 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 PTGR2Q8N8N7 351 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ACOT4Q8N9L9 421 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ST6GALNAC3Q8NDV1 305 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-217ENST00000624009 B3GNT7Q8NFL0 401 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 SUN3Q8TAQ9 357 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 WDR20Q8TBZ3 569 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 CNDP1Q96KN2 507 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 F2RL3Q96RI0 385 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 EPB41L4BQ9H329 900 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 DMRT3Q9NQL9 472 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 NECTIN3Q9NQS3 549 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 PCTPQ9UKL6 214 aa11.65□□□□□ -0.54
LINC00963-217ENST00000624009 ITPR2Q14571 2701 aa11.65□□□□□ -0.55
LINC00963-217ENST00000624009 FAM227AF5H4B4 570 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 SIX3O95343 332 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 OTCP00480 354 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 FAM153BP0C7A2 387 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 PCNAP12004 261 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 EDN3P14138 238 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 EEF1DP29692 281 aaKnown RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 TRHRP34981 398 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 CLCN2P51788 898 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 GPR143P51810 404 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 CCNG1P51959 295 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 IGLV3-21P80748 117 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 FAM153CQ494X1 144 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 PRR30Q53SZ7 412 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF793Q6ZN11 406 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 TDRPQ86YL5 185 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 TMEM132CQ8N3T6 1108 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 APCDD1LQ8NCL9 501 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 OR1N1Q8NGS0 311 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 DAZLQ92904 295 aaKnown RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 C19orf60Q96EN9 201 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 SCYL1Q96KG9 808 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 NOL11Q9H8H0 719 aaKnown RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 DDX31Q9H8H2 851 aaKnown RBP11.64□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF358Q9NW07 568 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 PHF11Q9UIL8 331 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 STK38LQ9Y2H1 464 aa11.64□□□□□ -0.55
LINC00963-217ENST00000624009 EML6Q6ZMW3 1958 aa11.63□□□□□ -0.55
LINC00963-217ENST00000624009 ANKUB1A6NFN9 424 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms