RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CD27P26842 260 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 PEBP1P30086 187 aaKnown RBP15.55■□□□□ 0.08
LDB3-208ENST00000623007 ALDH9A1P49189 494 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 GNA13Q14344 377 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 SUZ12Q15022 739 aaKnown RBP15.55■□□□□ 0.08
LDB3-208ENST00000623007 KIAA1614Q5VZ46 1190 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 OR52E8Q6IFG1 317 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 MRM1Q6IN84 353 aaKnown RBP15.55■□□□□ 0.08
LDB3-208ENST00000623007 PTCRAQ6ISU1 281 aaPredicted RBP15.55■□□□□ 0.08
LDB3-208ENST00000623007 TMEM64Q6YI46 380 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 ASPGQ86U10 573 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 NRROSQ86YC3 692 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 FBXL6Q8N531 539 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 CAMKVQ8NCB2 501 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 FLCNQ8NFG4 579 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 C17orf62Q9BQA9 187 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 DPH2Q9BQC3 489 aaPredicted RBP15.55■□□□□ 0.08
LDB3-208ENST00000623007 DOHHQ9BU89 302 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 LTB4R2Q9NPC1 389 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 LHX9Q9NQ69 397 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 C1GALT1Q9NS00 363 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 CPNE7Q9UBL6 633 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 PHF11Q9UIL8 331 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 PADI2Q9Y2J8 665 aa15.55■□□□□ 0.08
LDB3-208ENST00000623007 UPK1AO00322 258 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ZSCAN9O15535 394 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 H6PDO95479 791 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SEMG1P04279 462 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 NTRK1P04629 796 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ALPLP05186 524 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 THRBP10828 461 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CD72P21854 359 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SOAT1P35610 550 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 PLA2G16P53816 162 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 UBE2IP63279 158 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 SELENOWP63302 87 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 IL18R1Q13478 541 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SCARB2Q14108 478 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 PRRT3Q5FWE3 981 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ZC3H12BQ5HYM0 836 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 CRB2Q5IJ48 1285 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TOR1AIP1Q5JTV8 583 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDB3-208ENST00000623007 NDUFAF5Q5TEU4 345 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SAXO2Q658L1 398 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 OR2T5Q6IEZ7 315 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SHQ1Q6PI26 577 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 Q6ZS52 159 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ZNF551Q7Z340 670 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 UBE3DQ7Z6J8 389 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 STK32CQ86UX6 486 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 OOSP2Q86WS3 158 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 NAGSQ8N159 534 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 OR2T29Q8NH02 315 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SFXN5Q8TD22 340 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CIDECQ96AQ7 238 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 GABARAPL1Q9H0R8 117 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ABCG4Q9H172 646 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CD93Q9NPY3 652 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SLC35C2Q9NQQ7 365 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 PRDM7Q9NQW5 492 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TUBA8Q9NY65 449 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 SPHK1Q9NYA1 384 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ACTR10Q9NZ32 417 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ERVK-11Q9UQG0 969 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ENTPD4Q9Y227 616 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CA5BQ9Y2D0 317 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 RANBP2P49792 3224 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 IGHV1OR15-9A0A0B4J2B8 117 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SMIM31A0A1B0GVY4 71 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 DPPA5A6NC42 116 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 PDLIM1O00151 329 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TMPRSS11DO60235 418 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CLPTM1O96005 669 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 B3GALT4O96024 378 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ARAFP10398 606 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ATP5A1P25705 553 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 DNAJA1P31689 397 aaKnown RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 MVDP53602 400 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SH3BGRP55822 239 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 DSTNP60981 165 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TUBA4AP68366 448 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 CDK6Q00534 326 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SLAMF1Q13291 335 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 MPEG1Q2M385 716 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 KCTD21Q4G0X4 260 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TPRG1LQ5T0D9 272 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SLC36A4Q6YBV0 504 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 TAF8Q7Z7C8 310 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 SLC22A18ASQ8N1D0 253 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ACOT4Q8N9L9 421 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 ZNF555Q8NEP9 628 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 RMND5BQ96G75 393 aaPredicted RBP15.54■□□□□ 0.08
LDB3-208ENST00000623007 EPB41L1Q9H4G0 881 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 EPS8L2Q9H6S3 715 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 UCK1Q9HA47 277 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 A4GALTQ9NPC4 353 aa15.54■□□□□ 0.08
LDB3-208ENST00000623007 HEATR5BQ9P2D3 2071 aa15.53■□□□□ 0.08
LDB3-208ENST00000623007 METTL12A8MUP2 240 aa15.53■□□□□ 0.08
LDB3-208ENST00000623007 RTCAO00442 366 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms