RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RDH16O75452 317 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 DLGAP3O95886 979 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 FAM107AO95990 144 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 ITGAXP20702 1163 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 ITPKBP27987 946 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 MAPK1P28482 360 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 ABHD18Q0P651 414 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 DSG2Q14126 1118 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 SLC9A5Q14940 896 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 CCNYL2Q5T2Q4 361 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 C1orf189Q5VU69 101 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 SPATA19Q7Z5L4 167 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 PIGWQ7Z7B1 504 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 SPACA3Q8IXA5 215 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 DSELQ8IZU8 1212 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 MMABQ96EY8 250 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 DPH2Q9BQC3 489 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 ZNF304Q9HCX3 659 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 LYRM4Q9HD34 91 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 DLGAP4Q9Y2H0 992 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 POLR3HQ9Y535 204 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 ARHGAP10A1A4S6 786 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 GBAP04062 536 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 ANXA4P09525 319 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 MAPK12P53778 367 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 TRA2BP62995 288 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 DCDP81605 110 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 SLAMF1Q13291 335 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 RUNX2Q13950 521 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 IL23RQ5VWK5 629 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 CYP20A1Q6UW02 462 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 ZNF517Q6ZMY9 492 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 METTL27Q8N6F8 245 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 LYARQ9NX58 379 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 NOP53Q9NZM5 478 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 DAPP1Q9UN19 280 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 EIF3LQ9Y262 564 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 WBP11Q9Y2W2 641 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 MAP4K5Q9Y4K4 846 aa18.75■□□□□ 0.59
PDLIM2-221ENST00000622702 TEX51A0A1B0GUA7 166 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 GNG14A0A1W2PPG7 69 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 RAD1O60671 282 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 KLK3P07288 261 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 ALDOCP09972 364 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 FAM58BPP0C7Q3 252 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 PRPS2P11908 318 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 BCKDHAP12694 445 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 PCSK2P16519 638 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 GSTM5P46439 218 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 OR1D4P47884 311 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 ZNF763Q0D2J5 394 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 SF3A3Q12874 501 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 MAP7Q14244 749 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 NKAIN1Q4KMZ8 207 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 TIPARPQ7Z3E1 657 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 CA13Q8N1Q1 262 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 OR5T3Q8NGG3 340 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 NKD1Q969G9 470 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 RILPQ96NA2 401 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 C1orf50Q9BV19 199 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 EBPLQ9BY08 206 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 RABEP2Q9H5N1 569 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 SLC22A11Q9NSA0 550 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 KCMF1Q9P0J7 381 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 ASB4Q9Y574 426 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 MAU2Q9Y6X3 613 aa18.74■□□□□ 0.59
PDLIM2-221ENST00000622702 CHST10O43529 356 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 DNAJB6O75190 326 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 PIM1P11309 404 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 SDC1P18827 310 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 AGXTP21549 392 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 FBLP22087 321 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 DIO3P55073 304 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 LIM2P55344 173 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 OLR1P78380 273 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 TLE3Q04726 772 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 ARHGAP40Q5TG30 622 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 METTL21CQ5VZV1 264 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 TMEM198Q66K66 360 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 COX15Q7KZN9 410 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 GPR180Q86V85 440 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 CACNA2D3Q8IZS8 1091 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 NLGN4XQ8N0W4 816 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 GALNT6Q8NCL4 622 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 NLGN4YQ8NFZ3 816 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 COL26A1Q96A83 441 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 AIG1Q9NVV5 245 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 MS4A12Q9NXJ0 267 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 PHF11Q9UIL8 331 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 PKD1L2Q7Z442 2459 aa18.73■□□□□ 0.59
PDLIM2-221ENST00000622702 E9PBE3 544 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 UBDO15205 165 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 KLHL41O60662 606 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 GUCY1B2O75343 617 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 TACR1P25103 407 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 HNRNPH2P55795 449 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 MAT1AQ00266 395 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 C6orf15Q6UXA7 325 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms