RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 NDUFAF5Q5TEU4 345 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 DLEU7Q6UYE1 221 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 ARHGAP22Q7Z5H3 698 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 DHDDSQ86SQ9 333 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 ULK2Q8IYT8 1036 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 AMER3Q8N944 861 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 PRSS33Q8NF86 280 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 ZCCHC10Q8TBK6 192 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 CDRT15Q96T59 188 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 NPLQ9BXD5 320 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 PRDM9Q9NQV7 894 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
CLTCL1-212ENST00000622493 MYO15AQ9UKN7 3530 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 DMDP11532 3685 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 C1orf226A1L170 272 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 WNT3P56703 355 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 MC1RQ01726 317 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 GRM7Q14831 915 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 SF3A2Q15428 464 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 CSRP2Q16527 193 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 SPATS1Q496A3 300 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 DEFB134Q4QY38 66 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 SNAP47Q5SQN1 464 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 C6orf10Q5SRN2 563 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 LRIF1Q5T3J3 769 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 PGM2L1Q6PCE3 622 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 TICAM1Q8IUC6 712 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 CLK4Q9HAZ1 481 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 LYRM4Q9HD34 91 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 TEX10Q9NXF1 929 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 TMEM181Q9P2C4 612 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 DAPP1Q9UN19 280 aa13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-212ENST00000622493 A0A096LPI6 279 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 NTN3O00634 580 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 RFXANKO14593 260 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 PROM1O43490 865 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 GALR3O60755 368 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SLC6A2P23975 617 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SEPHS1P49903 392 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FAM214AQ32MH5 1076 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FBXW8Q8N3Y1 598 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FAM47BQ8NA70 645 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 CCDC115Q96NT0 180 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 CGREF1Q99674 301 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SH3GL1Q99961 368 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 TMEM9BQ9NQ34 198 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ABCD2Q9UBJ2 740 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FTSJ1Q9UET6 329 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ATG4BQ9Y4P1 393 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 PCDHA9Q9Y5H5 950 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 GPR179Q6PRD1 2367 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 HYKKA2RU49 373 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 LMNAP02545 664 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 CD59P13987 128 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 TLX1P31314 330 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 NBL1P41271 181 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SPEM2Q0P670 501 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 MUM1Q2TAK8 710 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF385BQ569K4 471 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 PIGGQ5H8A4 983 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SAMD4BQ5PRF9 694 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ANKRD26P1Q6NSI1 321 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 NANOGP8Q6NSW7 305 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 KIAA2013Q8IYS2 634 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 TTC29Q8NA56 475 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SLC39A3Q9BRY0 314 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 NANOGQ9H9S0 305 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SLC7A8Q9UHI5 535 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 AP3M1Q9Y2T2 418 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 NAALAD2Q9Y3Q0 740 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 SPACA6W5XKT8 324 aa13.47□□□□□ -0.25
CLTCL1-212ENST00000622493 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.25
CLTCL1-212ENST00000622493 A0A1W2PR48 441 aa13.46□□□□□ -0.25
CLTCL1-212ENST00000622493 A8MU76 341 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms