RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 HNRNPFP52597 415 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 PCDH1Q08174 1060 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 HIST2H2ACQ16777 129 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 MEP1AQ16819 746 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 PAGE2BQ5JRK9 111 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 HIST2H2AA3Q6FI13 130 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 BCORP1Q8N888 145 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 TMEM52Q8NDY8 209 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 NFAM1Q8NET5 270 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 ZIM3Q96PE6 472 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 TMEM109Q9BVC6 243 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 IQCGQ9H095 443 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 PRDM7Q9NQW5 492 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 OLAHQ9NV23 265 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 ANKRD10Q9NXR5 420 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 OPTCQ9UBM4 332 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 CLDN16Q9Y5I7 305 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 SAGE2PA6NJ88 616 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 TGFBR3LH3BV60 316 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 B3GALT2O43825 422 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 PRAMEF2O60811 474 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 KLHL2O95198 593 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 GP1BBP13224 206 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 CERS1P27544 350 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 CD96P40200 585 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 RAB38P57729 211 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 SRSF11Q05519 484 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 TUBA3CQ13748 450 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 ACAP2Q15057 778 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 TRIM40Q6P9F5 258 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 TUBA3EQ6PEY2 450 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 UBE3DQ7Z6J8 389 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 SCUBE1Q8IWY4 988 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 PLD6Q8N2A8 252 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 SUN3Q8TAQ9 357 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 ACMSDQ8TDX5 336 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF473Q8WTR7 871 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 SIGLEC12Q96PQ1 595 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 SERINC2Q96SA4 455 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 CDCP1Q9H5V8 836 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 MMACHCQ9Y4U1 282 aa16.81■□□□□ 0.28
SCAMP4-213ENST00000621748 DOPEY1Q5JWR5 2465 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 A0A088AWK7 358 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 WIPF3A6NGB9 483 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 LRRC14BA6NHZ5 514 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 CYR61O00622 381 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 KLK8O60259 260 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 COL6A2P12110 1019 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 EPB42P16452 691 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF10P21506 573 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 MTTPP55157 894 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 LIM2P55344 173 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 SETDB1Q15047 1291 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 INAQ16352 499 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 PFKFB4Q16877 469 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 TSNAXIP1Q2TAA8 658 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 MED27Q6P2C8 311 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 TIFABQ6ZNK6 161 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 RPS19BP1Q86WX3 136 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 LAS2Q8IYD9 372 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 SLC5A8Q8N695 610 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 FAM47BQ8NA70 645 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 ARMC2Q8NEN0 867 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 OR7G3Q8NG95 312 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 SCYL1Q96KG9 808 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 CSF3RQ99062 836 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 MS4A8Q9BY19 250 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 PRTFDC1Q9NRG1 225 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 DAPP1Q9UN19 280 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 MAST4O15021 2626 aa16.8■□□□□ 0.28
SCAMP4-213ENST00000621748 CCDC189A1A4V9 331 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 RTCAO00442 366 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 SH3BGRLO75368 114 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 RASAL1O95294 804 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 LDLRP01130 860 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 TGFB1P01137 390 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 PCNAP12004 261 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 GFAPP14136 432 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 GCAP28676 217 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 PPP2R1BP30154 601 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 CCT5P48643 541 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 TDGF1P3P51864 188 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 HSD17B7P56937 341 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 TAS2R50P59544 299 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF844Q08AG5 666 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF766Q5HY98 468 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 SPINK14Q6IE38 97 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF793Q6ZN11 406 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 LCA5Q86VQ0 697 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 RNF175Q8N4F7 328 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 MDS2Q8NDY4 140 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 NR4A3Q92570 626 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 UBE2E3Q969T4 207 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 KCNC2Q96PR1 638 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 SMC6Q96SB8 1091 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms