RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 VN1R4Q7Z5H5 301 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 RPS19BP1Q86WX3 136 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 ANKMY2Q8IV38 441 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 CHERPQ8IWX8 916 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 CAMKVQ8NCB2 501 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 FAM57AQ8TBR7 257 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ASB5Q8WWX0 329 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TSLPQ969D9 159 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 OR1F2PQ96R84 312 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 SMC6Q96SB8 1091 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TCF12Q99081 682 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 OLFM1Q99784 485 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TMEM184CQ9NVA4 438 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 GALPQ9UBC7 116 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 BAIAP2L1Q9UHR4 511 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TEX264Q9Y6I9 313 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ACANP16112 2415 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 HCFC1P51610 2035 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 ZNF407Q9C0G0 2248 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 FEZF1A0PJY2 475 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 ZNF860A6NHJ4 632 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 MAGEB17A8MXT2 336 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 GOLGA8MH3BSY2 632 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 AP3B1O00203 1094 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 FCHO1O14526 889 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 ZBTB14O43829 449 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 PRMT3O60678 531 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 ATP5HO75947 161 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 ZWINTO95229 277 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 SLC35G6P0C7Q6 338 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 KRT4P19013 534 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 IL10P22301 178 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 CCND1P24385 295 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 TPP2P29144 1249 aaPredicted RBP7.33□□□□□ -1.24
CLK1-215ENST00000621181 RFC3P40938 356 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 MSH2P43246 934 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 RHAGQ02094 409 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 MYBPHQ13203 477 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 TMEM211Q6ICI0 200 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 FGD2Q7Z6J4 655 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 KCT2Q8NC54 265 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 FBXO36Q8NEA4 188 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 FBF1Q8TES7 1133 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 SLC44A1Q8WWI5 657 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 RND1Q92730 232 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 MYCBPQ99417 103 aaPredicted RBP7.33□□□□□ -1.24
CLK1-215ENST00000621181 PAFAH2Q99487 392 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 UCK2Q9BZX2 261 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 VPS11Q9H270 941 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 CCDC68Q9H2F9 335 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 KCNJ16Q9NPI9 418 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 CCDC177Q9NQR7 707 aaPredicted RBP7.33□□□□□ -1.24
CLK1-215ENST00000621181 EIF2B3Q9NR50 452 aaKnown RBP7.33□□□□□ -1.24
CLK1-215ENST00000621181 TNFRSF10DQ9UBN6 386 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 KLF13Q9Y2Y9 288 aaPredicted RBP7.33□□□□□ -1.24
CLK1-215ENST00000621181 NAALAD2Q9Y3Q0 740 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 L3MBTL1Q9Y468 752 aa7.33□□□□□ -1.24
CLK1-215ENST00000621181 KCNE1BA0A087WTH5 132 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 KLRC4-KLRK1H3BQV0 150 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 CDK2AP1O14519 115 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 TM9SF1O15321 606 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 HS6ST1O60243 411 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 KRT15P19012 456 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 PAMP19021 973 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 OGNP20774 298 aaKnown RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 JAK1P23458 1154 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 MGAT1P26572 445 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 MSX1P28360 303 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 IMPA1P29218 277 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 DNAJA1P31689 397 aaKnown RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 GRK3P35626 688 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 NPY2RP49146 381 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 MEOX1P50221 254 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 CLCN7P51798 805 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 TBPL1P62380 186 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 SKP1P63208 163 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 HERC3Q15034 1050 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 CAPN13Q6MZZ7 669 aaPredicted RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 ARHGAP11AQ6P4F7 1023 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 C3orf62Q6ZUJ4 267 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 ASPGQ86U10 573 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 SLC26A11Q86WA9 606 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 PDSS2Q86YH6 399 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 CILP2Q8IUL8 1156 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 DMRTC2Q8IXT2 367 aaPredicted RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 MARVELD2Q8N4S9 558 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 POGLUT1Q8NBL1 392 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 FBXO15Q8NCQ5 510 aaPredicted RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 CHDHQ8NE62 594 aaPredicted RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 PLPP5Q8NEB5 264 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 OR5T3Q8NGG3 340 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 LILRB4Q8NHJ6 448 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 ELP5Q8TE02 316 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 PYROXD1Q8WU10 500 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 SLC13A3Q8WWT9 602 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 ASB11Q8WXH4 323 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 NRGNQ92686 78 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 ALKBH8Q96BT7 664 aaKnown RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 TBC1D20Q96BZ9 403 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms