RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ALPPP05187 535 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 HBQ1P09105 142 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 MSL3P1P0C860 447 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 IDH2P48735 452 aaKnown RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 ILKQ13418 452 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 NCF4Q15080 339 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ZMAT1Q5H9K5 638 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 AGTRAPQ6RW13 159 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ARMCX6Q7L4S7 300 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 VPS37AQ8NEZ2 397 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 OR52J3Q8NH60 311 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 RNF31Q96EP0 1072 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 MIXL1Q9H2W2 232 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 NMNAT1Q9HAN9 279 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 C14orf119Q9NWQ9 140 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 MUC22E2RYF6 1773 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 CNR2P34972 360 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 BNC1Q01954 994 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.49□□□□□ -0.41
SKP2-209ENST00000620197 ZNF763Q0D2J5 394 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 HENMT1Q5T8I9 393 aaKnown RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.49□□□□□ -0.41
SKP2-209ENST00000620197 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 SPPL2AQ8TCT8 520 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 WBP11Q9Y2W2 641 aaKnown RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 CCDC88CQ9P219 2028 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 ENTPD6O75354 484 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 PNLIPRP1P54315 467 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 CDC42P60953 191 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 PRKCZQ05513 592 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 OCLNQ16625 522 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 SLC5A12Q1EHB4 618 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 REPS1Q96D71 796 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 MTERF3Q96E29 417 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 TESQ9UGI8 421 aaKnown RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 HMX3A6NHT5 357 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 ADAP00813 363 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 RSBN1Q5VWQ0 802 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 C22orf39Q6P5X5 142 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 AQP11Q8NBQ7 271 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 ST13P5Q8NFI4 369 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 CIDECQ96AQ7 238 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 PDXPQ96GD0 296 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 PKP4Q99569 1192 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 TCF25Q9BQ70 676 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 MED18Q9BUE0 208 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 MARCH7Q9H992 704 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 TAS2R9Q9NYW1 312 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 PLEKHB1Q9UF11 243 aaPredicted RBP12.49□□□□□ -0.41
SKP2-209ENST00000620197 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 SH2B3Q9UQQ2 575 aa12.49□□□□□ -0.41
SKP2-209ENST00000620197 FADS2P1A8MWK0 482 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 NRG2O14511 850 aaPredicted RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 IDH3BO43837 385 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 C6orf47O95873 294 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 RB1P06400 928 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 SLC10A3P09131 477 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 FAM157BP0CG42 384 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 CDK6Q00534 326 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 SEC23BQ15437 767 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 CD300LDQ6UXZ3 194 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 ASZ1Q8WWH4 475 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 NEIL2Q969S2 332 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 VPS35Q96QK1 796 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 KCNS3Q9BQ31 491 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 SGPP1Q9BX95 441 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 A4GALTQ9NPC4 353 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 MRPS18AQ9NVS2 196 aaKnown RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 STUB1Q9UNE7 303 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 IL7P13232 177 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 OSMP13725 252 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 SELPP16109 830 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 STK19P49842 368 aaPredicted RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 SLC7A9P82251 487 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 CHRNEQ04844 493 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 MLLT11Q13015 90 aaPredicted RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 TP53BP2Q13625 1128 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 YIF1BQ5BJH7 314 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 CEACAM20Q6UY09 585 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 COMMD6Q7Z4G1 85 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 DNAJB7Q7Z6W7 309 aaPredicted RBP12.48□□□□□ -0.41
SKP2-209ENST00000620197 LAX1Q8IWV1 398 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms