RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	GAST	P01350	101 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	HSMCR30	P0CW71	290 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ANXA8	P13928	327 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	MANF	P55145	182 aa	Known RBP	10.69	□□□□□ -0.7
TP53-223	ENST00000618944	RBBP4	Q09028	425 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ZNF234	Q14588	700 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	SOWAHC	Q53LP3	525 aa	Predicted RBP	10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ZNF605	Q86T29	641 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	AMZ2	Q86W34	360 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ADGRF3	Q8IZF5	1079 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	DNAJC22	Q8N4W6	341 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	WFIKKN2	Q8TEU8	576 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	RAB8B	Q92930	207 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ZNF707	Q96C28	371 aa	Predicted RBP	10.69	□□□□□ -0.7
TP53-223	ENST00000618944	VMP1	Q96GC9	406 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	PRAP1	Q96NZ9	151 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	ALPK1	Q96QP1	1244 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	RAD9A	Q99638	391 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	NLN	Q9BYT8	704 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	OR52A5	Q9H2C5	316 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	TMEM38A	Q9H6F2	299 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	RNF167	Q9H6Y7	350 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	SLAMF7	Q9NQ25	335 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	SNX11	Q9Y5W9	270 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	PLXNA2	O75051	1894 aa		10.69	□□□□□ -0.7
TP53-223	ENST00000618944	EDDM13	A0A1B0GTR0	161 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	TBC1D3B	A6NDS4	549 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	WASHC1	A8K0Z3	465 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CLCA1	A8K7I4	914 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	STATH	P02808	62 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	SERPIND1	P05546	499 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	MYOG	P15173	224 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	GADD45A	P24522	165 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PIK3CB	P42338	1070 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CTSK	P43235	329 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	RXRG	P48443	463 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	BCAP31	P51572	246 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	MAPK12	P53778	367 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	DSTN	P60981	165 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	HSPB3	Q12988	150 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	FADD	Q13158	208 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	TIGD6	Q17RP2	521 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ZNF630	Q2M218	657 aa	Predicted RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CRB2	Q5IJ48	1285 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	WASH2P	Q6VEQ5	465 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	FAM129C	Q86XR2	697 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	HORMAD2	Q8N7B1	307 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ANKRD53	Q8N9V6	530 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	AQP11	Q8NBQ7	271 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	TMIE	Q8NEW7	156 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CXorf40A	Q8TE69	158 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	SETD7	Q8WTS6	366 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PHF10	Q8WUB8	498 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	GEMIN6	Q8WXD5	167 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	SLC38A4	Q969I6	547 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	RAD51AP1	Q96B01	352 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PPP1R14B	Q96C90	147 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	SIGLEC11	Q96RL6	698 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PIP5K1A	Q99755	562 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	DPEP2	Q9H4A9	486 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	IMPAD1	Q9NX62	359 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	MS4A12	Q9NXJ0	267 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	TAS2R16	Q9NYV7	291 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	DUSP12	Q9UNI6	340 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	B3GNT3	Q9Y2A9	372 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	POFUT2	Q9Y2G5	429 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	LTBP2	Q14767	1821 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	LOC100506127	A0A0U1RQW1	187 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	C17orf113	A0A1B0GUU1	675 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	IGLON5	A6NGN9	336 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	HOXC11	O43248	304 aa	Predicted RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	AIRE	O43918	545 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CCNB2	O95067	398 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	BCHE	P06276	602 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ITGA2	P17301	1181 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	UQCRC2	P22695	453 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	KEL	P23276	732 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	RPL3	P39023	403 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	P2RY2	P41231	377 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	WAS	P42768	502 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	XCR1	P46094	333 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	SERPINB10	P48595	397 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CSNK2B	P67870	215 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	RELA	Q04206	551 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ST3GAL4	Q11206	333 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CBX3	Q13185	183 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	DNASE1L3	Q13609	305 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ELAVL3	Q14576	367 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	PTGES3	Q15185	160 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	MAPK11	Q15759	364 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	LEXM	Q3ZCV2	418 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	UBE2U	Q5VVX9	321 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	CCDC80	Q76M96	950 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ERN2	Q76MJ5	926 aa	Known RBP	10.68	□□□□□ -0.7
TP53-223	ENST00000618944	C17orf64	Q86WR6	236 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	HEATR4	Q86WZ0	1026 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	ETFBKMT	Q8IXQ9	262 aa		10.68	□□□□□ -0.7
TP53-223	ENST00000618944	KRT78	Q8N1N4	520 aa		10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms