RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 TMEM52Q8NDY8 209 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 SRFBP1Q8NEF9 429 aaKnown RBP20.46■□□□□ 0.87
TRAF4-217ENST00000618771 NFAM1Q8NET5 270 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-217ENST00000618771 KIF18AQ8NI77 898 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 C5orf34Q96MH7 638 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 GPR78Q96P69 363 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 PAFAH2Q99487 392 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 ROGDIQ9GZN7 287 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 CDCP1Q9H5V8 836 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 PRDM7Q9NQW5 492 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 ANKRD10Q9NXR5 420 aa20.46■□□□□ 0.87
TRAF4-217ENST00000618771 KLK8O60259 260 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 MYO1DO94832 1006 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 CRYABP02511 175 aaKnown RBP20.45■□□□□ 0.86
TRAF4-217ENST00000618771 SERPINB1P30740 379 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 SERPINB9P50453 376 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 TDGF1P3P51864 188 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 RCN2Q14257 317 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 OR1C1Q15619 314 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 GRHL2Q6ISB3 625 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 ZNF595Q8IYB9 648 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 OR7G3Q8NG95 312 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 SIGLEC12Q96PQ1 595 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 CSF3RQ99062 836 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 TBCDQ9BTW9 1192 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 PNO1Q9NRX1 252 aaKnown RBP20.45■□□□□ 0.86
TRAF4-217ENST00000618771 CPSF2Q9P2I0 782 aaKnown RBP20.45■□□□□ 0.86
TRAF4-217ENST00000618771 OSGIN2Q9Y236 505 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 PCDHGB6Q9Y5F9 930 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 CLDN16Q9Y5I7 305 aa20.45■□□□□ 0.86
TRAF4-217ENST00000618771 TGFBR3LH3BV60 316 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 CYR61O00622 381 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 MAGEA12P43365 314 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 OC90Q02509 493 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-217ENST00000618771 TERF2Q15554 542 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 TMEM35AQ53FP2 167 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 TECRLQ5HYJ1 363 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 ZNF793Q6ZN11 406 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 UBE3DQ7Z6J8 389 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 CLNKQ7Z7G1 428 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 MYLK4Q86YV6 388 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-217ENST00000618771 PLD6Q8N2A8 252 aaKnown RBP20.44■□□□□ 0.86
TRAF4-217ENST00000618771 B3GNT7Q8NFL0 401 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 DNAJB8Q8NHS0 232 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 ISL2Q96A47 359 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 LYRM4Q9HD34 91 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 ADGRE2Q9UHX3 823 aa20.44■□□□□ 0.86
TRAF4-217ENST00000618771 POC1B-GALNT4F8VUJ3 575 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 SH3BGRLO75368 114 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 TGFB1P01137 390 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 CD46P15529 392 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 ATP5A1P25705 553 aaKnown RBP20.43■□□□□ 0.86
TRAF4-217ENST00000618771 PPP2R1BP30154 601 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 PMP22Q01453 160 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 DDX39BQ13838 428 aaKnown RBP20.43■□□□□ 0.86
TRAF4-217ENST00000618771 PCBP2Q15366 365 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■■■□□ 17.9
TRAF4-217ENST00000618771 SPINK14Q6IE38 97 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 CHSY3Q70JA7 882 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 HORMAD2Q8N7B1 307 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 ACOT4Q8N9L9 421 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 UHMK1Q8TAS1 419 aaKnown RBP20.43■□□□□ 0.86
TRAF4-217ENST00000618771 CMTM7Q96FZ5 175 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 DEFB126Q9BYW3 111 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 ACTR8Q9H981 624 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 ADAP2Q9NPF8 381 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 KLHL1Q9NR64 748 aa20.43■□□□□ 0.86
TRAF4-217ENST00000618771 TNPO3Q9Y5L0 923 aaKnown RBP20.43■□□□□ 0.86
TRAF4-217ENST00000618771 A0A087WUV0 522 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-217ENST00000618771 TRBV11-1A0A0K0K1C0 115 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 LRRC14BA6NHZ5 514 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 RTCAO00442 366 aaKnown RBP20.42■□□□□ 0.86
TRAF4-217ENST00000618771 CDK2AP1O14519 115 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 KRT38O76015 456 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 MST1P26927 711 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 TPP2P29144 1249 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-217ENST00000618771 PIK3CGP48736 1102 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 CLCN2P51788 898 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 KCNK10P57789 538 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 MLF1P58340 268 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 GTF2H2Q13888 395 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 AP5B1Q2VPB7 878 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 KHDRBS2Q5VWX1 349 aaKnown RBP20.42■□□□□ 0.86
TRAF4-217ENST00000618771 LIPJQ5W064 366 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 GTF2H2CQ6P1K8 395 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 GOLGA7Q7Z5G4 137 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 TMEM178AQ8NBL3 297 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 APCDD1LQ8NCL9 501 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 HUS1BQ8NHY5 278 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 SCMH1Q96GD3 660 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 MAPKAP1Q9BPZ7 522 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 HES7Q9BYE0 225 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 OR51B5Q9H339 312 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 ZNF358Q9NW07 568 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 KCMF1Q9P0J7 381 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 LRFN1Q9P244 771 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 ZNF180Q9UJW8 692 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 PCDHGA11Q9Y5H2 935 aa20.42■□□□□ 0.86
TRAF4-217ENST00000618771 CROCCQ5TZA2 2017 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 GTF3C1Q12789 2109 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms