RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 C15orf41Q9Y2V0 281 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SPTBP11277 2137 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PKDREJQ9NTG1 2253 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 NAV3Q8IVL0 2385 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 A0A0G2JMM0 328 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8QA0A0J9YX86 632 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 A0A1W2PPB8 328 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 A0A1W2PRS3 328 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8OA6NCC3 632 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 KIR3DP1A8MWS1 328 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8NF8WBI6 632 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8RI6L899 631 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SIAH2O43255 324 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CEP104O60308 925 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 OR1I1O60431 355 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SNX4O95219 450 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 TMIGD3P0DMS9 266 aaPredicted RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 SKILP12757 684 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 IMPA1P29218 277 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CTNNA1P35221 906 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 ARFIP1P53367 373 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 RGS1Q08116 209 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 LOXL1Q08397 574 aaPredicted RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 GUSBP1Q15486 140 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 BCL2A1Q16548 175 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SPRED3Q2MJR0 410 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 C6orf52Q5T4I8 152 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 C1QTNF12Q5T7M4 302 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 DEF8Q6ZN54 512 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SH2D5Q6ZV89 423 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PLEKHM3Q6ZWE6 761 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PRSS41Q7RTY9 318 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 TAX1BP1Q86VP1 789 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ZNF441Q8N8Z8 693 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 C17orf47Q8NEP4 570 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 OR5M9Q8NGP3 310 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SLC35G2Q8TBE7 412 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SLC22A8Q8TCC7 542 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 UTP15Q8TED0 518 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 NCLNQ969V3 563 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 WDYHV1Q96HA8 205 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ART5Q96L15 291 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CCDC138Q96M89 665 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 DNAJC7Q99615 494 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 OR2B2Q9GZK3 357 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ADAM19Q9H013 955 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SAMD15Q9P1V8 674 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ACAD8Q9UKU7 415 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.2□□□□□ -1.74
SNCA-213ENST00000618500 FAM166BA8MTA8 275 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 BTNL10A8MVZ5 291 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 A8MXE2 369 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 HS3ST1O14792 307 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CASKO14936 926 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 OR10H2O60403 315 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 C8GP07360 202 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CD8BP10966 210 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GRK3P35626 688 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 DEKP35659 375 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 SOX18P35713 384 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 GJC1P36383 396 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SOX3P41225 446 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 SCTRP47872 440 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 CLCN7P51798 805 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 RPS4XP62701 263 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 NTRK2Q16620 822 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 DUPD1Q68J44 220 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PTRHD1Q6GMV3 140 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 OR2A2Q6IF42 318 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 RNF10Q8N5U6 811 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 TTLQ8NG68 377 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 DAZLQ92904 295 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 GAL3ST3Q96A11 431 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PEX11GQ96HA9 241 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ZNF597Q96LX8 424 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PELOQ9BRX2 385 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 REG4Q9BYZ8 158 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 NAT10Q9H0A0 1025 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 ATG10Q9H0Y0 220 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 LYRM4Q9HD34 91 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 ZNHIT6Q9NWK9 470 aaKnown RBP4.2□□□□□ -1.74
SNCA-213ENST00000618500 WHRNQ9P202 907 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 PACSIN3Q9UKS6 424 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 AMFRQ9UKV5 643 aa4.2□□□□□ -1.74
SNCA-213ENST00000618500 A8MV72 311 aaPredicted RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 CAPN14A8MX76 684 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CD3EAPO15446 510 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 ZNHIT1O43257 154 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SCELO95171 688 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 STATHP02808 62 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SERPINA6P08185 405 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CSF3P09919 207 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 TPH1P17752 444 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CD79BP40259 229 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 CCR8P51685 355 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 SNRPNP63162 240 aaKnown RBP4.19□□□□□ -1.74
SNCA-213ENST00000618500 FUT7Q11130 342 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 HYAL2Q12891 473 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 RCN2Q14257 317 aa4.19□□□□□ -1.74
SNCA-213ENST00000618500 ODF2Q5BJF6 829 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms