RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CCNG1P51959 295 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 RAP1GDS1P52306 607 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 VSNL1P62760 191 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 INPP5JQ15735 1006 aaPredicted RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 EXT1Q16394 746 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 PLEKHN1Q494U1 663 aaPredicted RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 TMEM35AQ53FP2 167 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 KHDRBS2Q5VWX1 349 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 B3GNTL1Q67FW5 361 aaPredicted RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 ZNF793Q6ZN11 406 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 Q6ZS92 163 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 RPS27LQ71UM5 84 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 UBE3DQ7Z6J8 389 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 IQCKQ8N0W5 287 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 CYP4X1Q8N118 509 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 SRFBP1Q8NEF9 429 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 ARMC2Q8NEN0 867 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 EPS8L3Q8TE67 593 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 MZB1Q8WU39 189 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 MTERF1Q99551 399 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 ROGDIQ9GZN7 287 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 OR51B5Q9H339 312 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 NECTIN3Q9NQS3 549 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 PRDM7Q9NQW5 492 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 TMEM216Q9P0N5 145 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 ADGRE2Q9UHX3 823 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 ERRFI1Q9UJM3 462 aaPredicted RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 DAPP1Q9UN19 280 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 MRPS33Q9Y291 106 aaKnown RBP15□□□□□ -0.01
BRCA1-228ENST00000618469 RNF11Q9Y3C5 154 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 MMACHCQ9Y4U1 282 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 PCDHGA11Q9Y5H2 935 aa15□□□□□ -0.01
BRCA1-228ENST00000618469 IGKV3D-11A0A0A0MRZ8 115 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 TCRBV16S1A1N1A0A5B0 115 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 H0YIV9 168 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 SLU7O95391 586 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 CLDN9O95484 217 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 PYGBP11216 843 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 PIK3CBP42338 1070 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 HNRNPFP52597 415 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 LIM2P55344 173 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 RPS13P62277 151 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 ARG2P78540 354 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 ZNF33BQ06732 778 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 TRAF3Q13114 568 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 ZRSR2Q15696 482 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 CHSY3Q70JA7 882 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 CLNKQ7Z7G1 428 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 CUZD1Q86UP6 607 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 LCA5Q86VQ0 697 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 SCUBE1Q8IWY4 988 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 L3MBTL4Q8NA19 623 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 TMEM52Q8NDY8 209 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 ACMSDQ8TDX5 336 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 C19orf60Q96EN9 201 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 CENPKQ9BS16 269 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 TBCDQ9BTW9 1192 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 SORBS1Q9BX66 1292 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 ZBTB26Q9HCK0 441 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 SEMA4BQ9NPR2 832 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 PRTFDC1Q9NRG1 225 aa14.99□□□□□ -0.01
BRCA1-228ENST00000618469 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 V9GYY5 206 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 PRRC2CQ9Y520 2896 aaKnown RBP14.99□□□□□ -0.01
BRCA1-228ENST00000618469 DYTNA2CJ06 578 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 SAGE2PA6NJ88 616 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 A8MUI8 341 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 SCELO95171 688 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 F10P00742 488 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 TAC1P20366 129 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 HIST1H1TP22492 207 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-228ENST00000618469 ATP5A1P25705 553 aaKnown RBP14.98□□□□□ -0.01
BRCA1-228ENST00000618469 SLC26A5P58743 744 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 SLC13A2Q13183 592 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 RCN2Q14257 317 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 AP5B1Q2VPB7 878 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 ABHD17BQ5VST6 288 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 FCRLBQ6BAA4 426 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 CNPY4Q8N129 248 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 TMEM151AQ8N4L1 468 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 ACOT4Q8N9L9 421 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 DNAJB14Q8TBM8 379 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 ZNF483Q8TF39 744 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-228ENST00000618469 LMF1Q96S06 567 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 PPCSQ9HAB8 311 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 MMP25Q9NPA2 562 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 PLA2G3Q9NZ20 509 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 TEKT2Q9UIF3 430 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 TSC22D4Q9Y3Q8 395 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 PCDHGA10Q9Y5H3 936 aa14.98□□□□□ -0.01
BRCA1-228ENST00000618469 DOPEY1Q5JWR5 2465 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 A0A1W2PPM1 405 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 A8MUA0 341 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 FOXO6A8MYZ6 492 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 ESPNB1AK53 854 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 TGFBR3LH3BV60 316 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 CLDN4O14493 209 aa14.97□□□□□ -0.01
BRCA1-228ENST00000618469 PLPP1O14494 284 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms