RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 DLEU7Q6UYE1 221 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 BCDIN3DQ7Z5W3 292 aaKnown RBP11.79□□□□□ -0.52
MATR3-227ENST00000618441 APH1BQ8WW43 257 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 YIPF5Q969M3 257 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 DDOQ99489 341 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 PCDHGA6Q9Y5G7 932 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 PCDHGA1Q9Y5H4 931 aa11.79□□□□□ -0.52
MATR3-227ENST00000618441 OR6C74A6NCV1 312 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OR6C75A6NL08 312 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 DISC1C4P0D8 188 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 FPGTO14772 594 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 SRP9P49458 86 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 SPIBQ01892 262 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 GPR155Q7Z3F1 870 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ZNF548Q8NEK5 533 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 PELOQ9BRX2 385 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OR51B5Q9H339 312 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OR51J1Q9H342 316 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ABHD16BQ9H3Z7 469 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 TMEM161AQ9NX61 479 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 TRAPPC4Q9Y296 219 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 KCTD3Q9Y597 815 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 DOCK2Q92608 1830 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 NPEPPSL1A6NEC2 478 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 I6L893 689 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 CILPO75339 1184 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 SOX14O95416 240 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 URODP06132 367 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ACVR2AP27037 513 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ASMTP46597 345 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 MC2RQ01718 297 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OC90Q02509 493 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 MBTPS1Q14703 1052 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 MFSD14CQ5VZR4 134 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 NIPA1Q7RTP0 329 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ZFAND4Q86XD8 727 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 OR52B6Q8NGF0 335 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 SERPINB11Q96P15 392 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 ADAT1Q9BUB4 502 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 LDAHQ9H6V9 325 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 RC3H2Q9HBD1 1191 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 TAS2R3Q9NYW6 316 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 NDRG4Q9ULP0 352 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 EXO1Q9UQ84 846 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 KRBOX1C9JBD0 128 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 TNFRSF11BO00300 401 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 CDC7O00311 574 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 AOC2O75106 756 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 DNAJB6O75190 326 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■■□□□ 12.2
MATR3-227ENST00000618441 MLC1Q15049 377 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 HES5Q5TA89 166 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 IL20RBQ6UXL0 311 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 RELL2Q8NC24 303 aaPredicted RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 RELTQ969Z4 430 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 EXOSC8Q96B26 276 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 HSH2DQ96JZ2 352 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 SPSB2Q99619 263 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 NLNQ9BYT8 704 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 DCAF13Q9NV06 445 aaKnown RBP11.78□□□□□ -0.52
MATR3-227ENST00000618441 CLN6Q9NWW5 311 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 MIOXQ9UGB7 285 aa11.78□□□□□ -0.52
MATR3-227ENST00000618441 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.52
MATR3-227ENST00000618441 ADAM11O75078 769 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 SPDEFO95238 335 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 CTNNB1P35222 781 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 NCF4Q15080 339 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 SURF1Q15526 300 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 NTRK2Q16620 822 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 HMGB4Q8WW32 186 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 NR4A3Q92570 626 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 HS6ST2Q96MM7 605 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 GPR137Q96N19 417 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 SLC2A13Q96QE2 648 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 MED10Q9BTT4 135 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.52
MATR3-227ENST00000618441 ATP13A1Q9HD20 1204 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 SERHLQ9NQF3 203 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 RBM22Q9NW64 420 aaKnown RBP eCLIP11.77□□□□□ -0.528e-10■■■□□ 17.9
MATR3-227ENST00000618441 MRTO4Q9UKD2 239 aaKnown RBP11.77□□□□□ -0.52
MATR3-227ENST00000618441 FKBP7Q9Y680 259 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 KCNMB2Q9Y691 235 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 PTPRFP10586 1907 aa11.77□□□□□ -0.52
MATR3-227ENST00000618441 A0A075B6Q4 140 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 STAU1O95793 577 aaKnown RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 F2P00734 622 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms