RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ABHD17CQ6PCB6 329 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZBED8Q8IZ13 594 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ACBD4Q8NC06 268 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 PSD4Q8NDX1 1056 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ESAMQ96AP7 390 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 C14orf79Q96F83 325 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 SERINC2Q96SA4 455 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 CAPS2Q9BXY5 557 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 PITHD1Q9GZP4 211 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 EHD1Q9H4M9 534 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 TIMMDC1Q9NPL8 285 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 PLSCR2Q9NRY7 297 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 DNAJC11Q9NVH1 559 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ITGB1BP2Q9UKP3 347 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 DAPP1Q9UN19 280 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ERVK-11Q9UQG0 969 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 MTO1Q9Y2Z2 717 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF407Q9C0G0 2248 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 EML6Q6ZMW3 1958 aa19.32■□□□□ 0.68
TRAPPC3-208ENST00000616074 ANKRD17O75179 2603 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 HCFC1P51610 2035 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 MYOCOSA0A1B0GUC4 107 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 USP27XA6NNY8 438 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 A8MVJ9 347 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 EFCAB8A8MWE9 144 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR2J2O76002 312 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 PDE9AO76083 593 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 TUBB4AP04350 444 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 GGT5P36269 586 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 RPL21P46778 160 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 HSPA7P48741 367 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 MTTPP55157 894 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 POU4F1Q01851 419 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 ELAVL1Q15717 326 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 XKR6Q5GH73 641 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 CEP128Q6ZU80 1094 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 TCAIMQ8N3R3 496 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 SREK1Q8WXA9 508 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 COPS7BQ9H9Q2 264 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 HPF1Q9NWY4 346 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF490Q9ULM2 529 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 SNX24Q9Y343 169 aa19.31■□□□□ 0.68
TRAPPC3-208ENST00000616074 HIVEP1P15822 2718 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 PINLYPA6NC86 204 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 CLGNO14967 610 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 PHGDHO43175 533 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR6B1O95007 311 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 IFNA16P05015 189 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 CD22P20273 847 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 HPDP32754 393 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 BMPR2Q13873 1038 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 DOC2AQ14183 400 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 ARHGAP11AQ6P4F7 1023 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 IL20RBQ6UXL0 311 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 MEX3BQ6ZN04 569 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 GPSM1Q86YR5 675 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 GPALPP1Q8IXQ4 340 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 TMEM132CQ8N3T6 1108 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 SNX31Q8N9S9 440 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 CHTF18Q8WVB6 975 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 ASB15Q8WXK1 588 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 PTCD3Q96EY7 689 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 RASL10BQ96S79 203 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 TREX2Q9BQ50 279 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 DEFB127Q9H1M4 99 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 CNOT10Q9H9A5 744 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 MYOTQ9UBF9 498 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 CLCA3PQ9Y6N3 262 aa19.3■□□□□ 0.68
TRAPPC3-208ENST00000616074 PHF3Q92576 2039 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CXorf49A8MYA2 514 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CCDC188H7C350 402 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 WWP2O00308 870 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CTNSO60931 367 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 STK16O75716 305 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CCDC166P0CW27 439 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CD1DP15813 335 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 SOX3P41225 446 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 TLE4Q04727 773 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 CBLBQ13191 982 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR4D1Q15615 310 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 HSDL2Q6YN16 418 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 RPRMLQ8N4K4 120 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF321PQ8N8H1 164 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 PTPMT1Q8WUK0 201 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 WDR34Q96EX3 536 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 F2RL3Q96RI0 385 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 ALOXE3Q9BYJ1 711 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 TP63Q9H3D4 680 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 PRDM7Q9NQW5 492 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 SAR1BQ9Y6B6 198 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 DNAJC13O75165 2243 aa19.29■□□□□ 0.68
TRAPPC3-208ENST00000616074 A0A0G2JMM0 328 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 A0A1W2PPB8 328 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 A0A1W2PRS3 328 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 SYNDIG1LA6NDD5 238 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 FAM166BA8MTA8 275 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 KIR3DP1A8MWS1 328 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 EPORP19235 508 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 SSTR1P30872 391 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 HK2P52789 917 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms