RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PLAGL1Q9UM63 463 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 ZNF521Q96K83 1311 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 COL1A2P08123 1366 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 SLC19A2O60779 497 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CD63P08962 238 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SHMT2P34897 504 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 PDK3Q15120 406 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 TOMM5Q8N4H5 51 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 TFGQ92734 400 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 RNF157Q96PX1 679 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ENKD1Q9H0I2 346 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ATG5Q9H1Y0 275 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 PEX16Q9Y5Y5 336 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 YY2O15391 372 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 FGF18O76093 207 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 TMEM225BP0DP42 221 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 PRPS2P11908 318 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 ART1P52961 327 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 LDB1Q86U70 411 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 CMTM1Q8IZ96 169 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 BBS10Q8TAM1 723 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 TWIST2Q8WVJ9 160 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ERGIC2Q96RQ1 377 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 UNC93B1Q9H1C4 597 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 YES1P07947 543 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 PTAFRP25105 342 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 LTC4SQ16873 150 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ZNF542PQ5EBM4 170 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CRB3Q9BUF7 120 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SNX15Q9NRS6 342 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ACTL7AQ9Y615 435 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CYP3A7-CYP3A51PA0A087WV96 503 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ZNF860A6NHJ4 632 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 ENTPD6O75354 484 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 MAFO75444 373 aaPredicted RBP12.2□□□□□ -0.46
TCF4-248ENST00000616053 ALADP13716 330 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 HLA-EP13747 358 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CYP3A7P24462 503 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 LRRN3Q9H3W5 708 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 C17orf113A0A1B0GUU1 675 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 A0A1B0GV50 99 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CH25HO95992 272 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A6P0DMU7 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A5P0DMU8 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A7P0DMV0 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A8P0DMV1 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A9P0DMV2 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 KITLGP21583 273 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 GJA5P36382 358 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CCL11P51671 97 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A2Q5DJT8 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A1Q5HYN5 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SLC15A3Q8IY34 581 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 METTL4Q8N3J2 472 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CT45A3Q8NHU0 189 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 OR14A2Q96R54 314 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 GPR25O00155 361 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CSTAP01040 98 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 DHRS4L1P0CG22 281 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SFTPDP35247 375 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 DSTNP60981 165 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 GABREP78334 506 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 NATD1Q8N6N6 113 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 OR5AK3PQ8NH89 298 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CIB1Q99828 191 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 SLC39A1Q9NY26 324 aa12.2□□□□□ -0.46
TCF4-248ENST00000616053 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 MTMR11A4FU01 709 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 HDAC3O15379 428 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TIMM8AO60220 97 aaPredicted RBP12.19□□□□□ -0.46
TCF4-248ENST00000616053 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 KCNK5O95279 499 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TYRP14679 529 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TCN2P20062 427 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 PGCP20142 388 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 GLRA2P23416 452 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 MOAP1Q96BY2 351 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 SLC19A3Q9BZV2 496 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TWSG1Q9GZX9 223 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 NUDT19A8MXV4 375 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 KLRC4-KLRK1H3BQV0 150 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 UBOX5O94941 541 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 NPTX1Q15818 432 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
TCF4-248ENST00000616053 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 POLR2J2Q9GZM3 115 aaKnown RBP12.19□□□□□ -0.46
TCF4-248ENST00000616053 ZNF358Q9NW07 568 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 EMC3Q9P0I2 261 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 ZNF33BQ06732 778 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 BATFQ16520 125 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 WDR92Q96MX6 357 aa12.19□□□□□ -0.46
TCF4-248ENST00000616053 PWWP2AQ96N64 755 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms