RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TGFBIQ15582 683 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 ALKBH2Q6NS38 261 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 ARHGAP11AQ6P4F7 1023 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 UTS2BQ765I0 119 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 PQLC3Q8N755 202 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 ZSCAN4Q8NAM6 433 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 CAPNS2Q96L46 248 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 YIPF4Q9BSR8 244 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 OR51I1Q9H343 314 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 FBRSQ9HAH7 460 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 SH3D21A4FU49 640 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 MUSKO15146 869 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 DENRO43583 198 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 POP7O75817 140 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 SCGB1D2O95969 90 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 FGF3P11487 239 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 CD1DP15813 335 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TIA1P31483 386 aaKnown RBP eCLIP4.4□□□□□ -1.76e-9■■■■■ 31.4
CHD9-221ENST00000615216 ACVRL1P37023 503 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 GSCP56915 257 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 PRKCZQ05513 592 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 ZNF33BQ06732 778 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 CHAF1BQ13112 559 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 MRPL49Q13405 166 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 TUBB3Q13509 450 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 GPRC6AQ5T6X5 926 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 SHQ1Q6PI26 577 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 MARVELD2Q8N4S9 558 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 SEC14L1Q92503 715 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TMEM125Q96AQ2 219 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 IMP4Q96G21 291 aaKnown RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 PEBP4Q96S96 227 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 SLC5A7Q9GZV3 580 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 SLC2A6Q9UGQ3 507 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 AKAP11Q9UKA4 1901 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TRBV23OR9-2A0A075B6M9 112 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 BORCS7-ASMTA0A0B4J1R7 106 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 EIF3FO00303 357 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 TSPAN6O43657 245 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TYROBPO43914 113 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 PENKP01210 267 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 SCAPQ12770 1279 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 UPP1Q16831 310 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 ANKDD1AQ495B1 522 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 PM20D2Q8IYS1 436 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 OR4K14Q8NGD5 310 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TFGQ92734 400 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 TREM1Q9NP99 234 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 CCM2LQ9NUG4 571 aaPredicted RBP4.4□□□□□ -1.7
CHD9-221ENST00000615216 INSL5Q9Y5Q6 135 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 NFS1Q9Y697 457 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 TMEM14AQ9Y6G1 99 aa4.4□□□□□ -1.7
CHD9-221ENST00000615216 M0R129 80 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 PROM1O43490 865 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 MMP20O60882 483 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 KCNJ13O60928 360 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 RPP14O95059 124 aaKnown RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 RABGGTBP53611 331 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 GPR17Q13304 367 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 ITPRIPL2Q3MIP1 535 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 ANKRD26P1Q6NSI1 321 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 NOXRED1Q6NXP6 359 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 SLC27A4Q6P1M0 643 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 CMTR2Q8IYT2 770 aaKnown RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 ZNF709Q8N972 641 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 DDX1Q92499 740 aaKnown RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 TMEM121BQ9BXQ6 578 aaPredicted RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 SOBPA7XYQ1 873 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 PEX12O00623 359 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 KLK3P07288 261 aaPredicted RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 CD9P21926 228 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 BNIP3Q12983 259 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 CARTPTQ16568 116 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 GDF6Q6KF10 455 aaPredicted RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 Q6ZVU0 165 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 HAVCR2Q8TDQ0 301 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 SETD7Q8WTS6 366 aaKnown RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 THEM6Q8WUY1 208 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 TCEAL4Q96EI5 215 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 HSPA12BQ96MM6 686 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 CCDC32Q9BV29 185 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 ZNF696Q9H7X3 374 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 KCNN3Q9UGI6 736 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 AP1M2Q9Y6Q5 423 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 EME2A4GXA9 379 aaPredicted RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 SYNGR4O95473 234 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 APBB3O95704 486 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 ZNF84P51523 738 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 PSMA6P60900 246 aaKnown RBP4.4□□□□□ -1.71
CHD9-221ENST00000615216 S100A12P80511 92 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 FBXL20Q96IG2 436 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 STRADBQ9C0K7 418 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 DNAJC27Q9NZQ0 273 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 LTBP3Q9NS15 1303 aa4.4□□□□□ -1.71
CHD9-221ENST00000615216 TTC24A2A3L6 582 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms