RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ZNF460Q14592 562 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 EFTUD2Q15029 972 aaKnown RBP eCLIP11.35□□□□□ -0.596e-8■■■■□ 20.2
PDLIM2-218ENST00000614502 C3AR1Q16581 482 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 ZNF630Q2M218 657 aaPredicted RBP11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 KBTBD12Q3ZCT8 623 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 CEP97Q8IW35 865 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 GPALPP1Q8IXQ4 340 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 SHISA5Q8N114 240 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 TMEM132CQ8N3T6 1108 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 KIF2BQ8N4N8 673 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 TMEM156Q8N614 296 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 NFAM1Q8NET5 270 aaPredicted RBP11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 OR2L5Q8NG80 312 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 UBE2E3Q969T4 207 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 MS4A6EQ96DS6 147 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 RBBP8Q99708 897 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 HES7Q9BYE0 225 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 REXO4Q9GZR2 422 aaKnown RBP11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 ADAP2Q9NPF8 381 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 NECTIN3Q9NQS3 549 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 NINJ2Q9NZG7 142 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 PPIEQ9UNP9 301 aaKnown RBP11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 SPACA6W5XKT8 324 aa11.35□□□□□ -0.59
PDLIM2-218ENST00000614502 TRBV11-1A0A0K0K1C0 115 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 A8MUA0 341 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 MAN1A2O60476 641 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 MYO1DO94832 1006 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 RHOXF2BP0C7M4 288 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 TFEBP19484 476 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 GDF5P43026 501 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 NAB1Q13506 487 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 PDK4Q16654 411 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 ADPRMQ3LIE5 342 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 XKR6Q5GH73 641 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 GRTP1Q5TC63 336 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 GDF7Q7Z4P5 450 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 SCUBE1Q8IWY4 988 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 CTAGE3PQ8IX95 158 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 APCDD1LQ8NCL9 501 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 PDPRQ8NCN5 879 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 PHF10Q8WUB8 498 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 DAZLQ92904 295 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 WDR34Q96EX3 536 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 GPR22Q99680 433 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 RHOXF2Q9BQY4 288 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 FUT8Q9BYC5 575 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 CDC42EP4Q9H3Q1 356 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 CD274Q9NZQ7 290 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 FBXW2Q9UKT8 454 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 NFU1Q9UMS0 254 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 DAPP1Q9UN19 280 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 MTO1Q9Y2Z2 717 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 YARS2Q9Y2Z4 477 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 MEMO1Q9Y316 297 aa11.34□□□□□ -0.59
PDLIM2-218ENST00000614502 HIVEP1P15822 2718 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 TFECO14948 347 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 ITGA10O75578 1167 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 ZFAND5O76080 213 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 WISP3O95389 354 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 COX6B1P14854 86 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 CD1DP15813 335 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 SERPINB1P30740 379 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 PHBP35232 272 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 KCNC1P48547 511 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 HSPA7P48741 367 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 SSR4P51571 173 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 PLA2G16P53816 162 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 RAB10P61026 200 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 IRF8Q02556 426 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 BIKQ13323 160 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 RUNX2Q13950 521 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 ELAVL1Q15717 326 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 TBCCQ15814 346 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 UBAP2Q5T6F2 1119 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 LRRC70Q7Z2Q7 622 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 CCDC91Q7Z6B0 441 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 SIAH3Q8IW03 269 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 CYP4Z2PQ8N1L4 340 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 PPM1NQ8N819 430 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 STAG3L4Q8TBR4 150 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 KCNC2Q96PR1 638 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 TMEM79Q9BSE2 394 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 NMRAL1Q9HBL8 299 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 LYRM4Q9HD34 91 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 PRM3Q9NNZ6 103 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 ADGRE2Q9UHX3 823 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 TINAGQ9UJW2 476 aa11.33□□□□□ -0.6
PDLIM2-218ENST00000614502 CLCA3PQ9Y6N3 262 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms