RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CYP4Z1Q86W10 505 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 WDR20Q8TBZ3 569 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 ZNF480Q8WV37 535 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 NEIL2Q969S2 332 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 CHFRQ96EP1 664 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 RUBCNLQ9H714 662 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 RANGRFQ9HD47 186 aaPredicted RBP15.79■□□□□ 0.12
CNOT3-208ENST00000613073 PRSS16Q9NQE7 514 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 SERHLQ9NQF3 203 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 VNN3Q9NY84 501 aa15.79■□□□□ 0.12
CNOT3-208ENST00000613073 A0A096LPI6 279 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 EPOPA6NHQ4 379 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 MAGEB17A8MXT2 336 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 TMCC2O75069 709 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 POP7O75817 140 aaKnown RBP15.78■□□□□ 0.12
CNOT3-208ENST00000613073 DIRAS1O95057 198 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 EFNA1P20827 205 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-208ENST00000613073 C21orf33P30042 268 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-208ENST00000613073 TMPRSS11BQ86T26 416 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 SYT12Q8IV01 421 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 C2orf73Q8N5S3 287 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-208ENST00000613073 KXD1Q9BQD3 176 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 VPS29Q9UBQ0 182 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 RABL2BQ9UNT1 228 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 GMPPBQ9Y5P6 360 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 DOCK9Q9BZ29 2069 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 ATG2AQ2TAZ0 1938 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 MYO1GB0I1T2 1018 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 LINC01565O15544 149 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 CYP4F2P78329 520 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 DAB2P98082 770 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 RUNX3Q13761 415 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 FXNQ16595 210 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 RUNDC3AQ59EK9 446 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 CXorf40AQ8TE69 158 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 PHOX2BQ99453 314 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 KCNS3Q9BQ31 491 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 KIF26AQ9ULI4 1882 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-208ENST00000613073 SH2B3Q9UQQ2 575 aa15.78■□□□□ 0.12
CNOT3-208ENST00000613073 NUMA1Q14980 2115 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 DDX5P17844 614 aaKnown RBP15.77■□□□□ 0.12
CNOT3-208ENST00000613073 MAPK1P28482 360 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 RYKP34925 604 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 KRT20P35900 424 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 TBPL1P62380 186 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 CD83Q01151 205 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 MADCAM1Q13477 382 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 PDGFRLQ15198 375 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 ZNF517Q6ZMY9 492 aaPredicted RBP15.77■□□□□ 0.12
CNOT3-208ENST00000613073 ZNF548Q8NEK5 533 aaPredicted RBP15.77■□□□□ 0.12
CNOT3-208ENST00000613073 GPR156Q8NFN8 814 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 CHCHD6Q9BRQ6 235 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 ZCCHC2Q9C0B9 1178 aaKnown RBP15.77■□□□□ 0.12
CNOT3-208ENST00000613073 MMP28Q9H239 520 aa15.77■□□□□ 0.12
CNOT3-208ENST00000613073 KAT7O95251 611 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 PRPH2P23942 346 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 MVKQ03426 396 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 TAB1Q15750 504 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 ZNF658BQ4V348 819 aaPredicted RBP15.77■□□□□ 0.11
CNOT3-208ENST00000613073 SPANXN2Q5MJ10 180 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 SDE2Q6IQ49 451 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 AMER2Q8N7J2 671 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 KIAA1958Q8N8K9 716 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 SIMC1Q8NDZ2 872 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 OR56A3Q8NH54 315 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 NRTNQ99748 197 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 OR51E2Q9H255 320 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 GDE1Q9NZC3 331 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 NUFIP1Q9UHK0 495 aaKnown RBP15.77■□□□□ 0.11
CNOT3-208ENST00000613073 RNF6Q9Y252 685 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 TRPM6Q9BX84 2022 aa15.77■□□□□ 0.11
CNOT3-208ENST00000613073 A0A1W2PQ72 361 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 ELOVL7A1L3X0 281 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 OR2A25A4D2G3 310 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 LOC110117498-PIK3R3F6TDL0 507 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 CTDSP2O14595 271 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 PCCBP05166 539 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 SLC15A1P46059 708 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 MEF2AQ02078 507 aaPredicted RBP15.76■□□□□ 0.11
CNOT3-208ENST00000613073 FAM83HQ6ZRV2 1179 aaPredicted RBP15.76■□□□□ 0.11
CNOT3-208ENST00000613073 CCDC28AQ8IWP9 274 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 ADHFE1Q8IWW8 467 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 SVOPLQ8N434 492 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 OR7G3Q8NG95 312 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 OR5K1Q8NHB7 308 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 NKX2-4Q9H2Z4 354 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 STMN3Q9NZ72 180 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 PLAGL1Q9UM63 463 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 KCNE2Q9Y6J6 123 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 IGLON5A6NGN9 336 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 CDK2AP1O14519 115 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 RFXANKO14593 260 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 UGDHO60701 494 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 SCO1O75880 301 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 PAPLNO95428 1278 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 ACSM2AQ08AH3 577 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 ACSM2BQ68CK6 577 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 GRHL2Q6ISB3 625 aa15.76■□□□□ 0.11
CNOT3-208ENST00000613073 YAF2Q8IY57 180 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms