RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 LHFPL3Q86UP9 236 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 DNAJA4Q8WW22 397 aaPredicted RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 NUP205Q92621 2012 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 PTPN18Q99952 460 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 YIPF4Q9BSR8 244 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 DPCDQ9BVM2 203 aaPredicted RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 TMEM27Q9HBJ8 222 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 CNOT2Q9NZN8 540 aaKnown RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 PCDHGB2Q9Y5G2 931 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ANKRD28O15084 1053 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 CAPNS1P04632 268 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 MTHFD2P13995 350 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ZXDBP98169 803 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 DOC2AQ14183 400 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 UGT3A2Q3SY77 523 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 NUDT13Q86X67 352 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ZNF558Q96NG5 402 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 FERD3LQ96RJ6 166 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 NTMT1Q9BV86 223 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ACPTQ9BZG2 426 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 CXCL16Q9H2A7 254 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 RETREG1Q9H6L5 497 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 RANGRFQ9HD47 186 aaPredicted RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 MARK1Q9P0L2 795 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ZFR2Q9UPR6 939 aaKnown RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 BOLA1Q9Y3E2 137 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 KLK4Q9Y5K2 254 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 A6NL46 340 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ADORA3P0DMS8 318 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 MAGEA2P43356 314 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 SLC3A1Q07837 685 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 DLEU7Q6UYE1 221 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 Q6ZPB1 254 aaPredicted RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 RANBP3LQ86VV4 465 aaPredicted RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 KIF18BQ86Y91 864 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 SRFBP1Q8NEF9 429 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 DNASE1L2Q92874 299 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ELAC1Q9H777 363 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 CSNK1G1Q9HCP0 422 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 BRD7Q9NPI1 651 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ASAH2Q9NR71 780 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PRKAG2Q9UGJ0 569 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PSORS1C1Q9UIG5 152 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 EEF1E1O43324 174 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 OSMP13725 252 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 LIPAP38571 399 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 GPR17Q13304 367 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 SGCGQ13326 291 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PTGES3Q15185 160 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 RGMBQ6NW40 437 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 METTL2BQ6P1Q9 378 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 C1orf216Q8TAB5 229 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ZBED3Q96IU2 234 aaPredicted RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 MLXQ9UH92 298 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ABHD14A-ACY1A0A1B0GW23 586 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 MTMR11A4FU01 709 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 FHP07954 510 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 UQCRC2P22695 453 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 NCBP2P52298 156 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS36-207ENST00000611132 VLDLRP98155 873 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PUDPQ08623 228 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 RIPPLY1Q0D2K3 151 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ZNHIT3Q15649 155 aaPredicted RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 CARD16Q5EG05 197 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 CEP68Q76N32 757 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 MDGA1Q8NFP4 955 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 OR52N2Q8NGI0 321 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 DYNC2LI1Q8TCX1 351 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 MBOAT4Q96T53 435 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 DOK1Q99704 481 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 NDC1Q9BTX1 674 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 CENPOQ9BU64 300 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 CD93Q9NPY3 652 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 IL17CQ9P0M4 197 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ACSL6Q9UKU0 697 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PCDHGB1Q9Y5G3 927 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 OR2A25A4D2G3 310 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 HLA-DQA2P01906 255 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 HNF1BP35680 557 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 DEFA5Q01523 94 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 RHAGQ02094 409 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ST3GAL3Q11203 375 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 ZNF438Q7Z4V0 828 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 PSD2Q9BQI7 771 aa14.05□□□□□ -0.16
VPS36-207ENST00000611132 WRAP53Q9BUR4 548 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 NMNAT1Q9HAN9 279 aaPredicted RBP14.05□□□□□ -0.16
VPS36-207ENST00000611132 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
VPS36-207ENST00000611132 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
VPS36-207ENST00000611132 FAM25EA8MYX2 175 aa14.04□□□□□ -0.16
VPS36-207ENST00000611132 SLC16A5O15375 505 aa14.04□□□□□ -0.16
VPS36-207ENST00000611132 ARL6IP5O75915 188 aa14.04□□□□□ -0.16
VPS36-207ENST00000611132 PRAMEF12O95522 483 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms