RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ANKMY1Q9P2S6 941 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PTBP2Q9UKA9 531 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PCDHB3Q9Y5E6 796 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PCDHGA7Q9Y5G6 932 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 DLEC1Q9Y238 1755 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 KHNYNO15037 678 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SCAMP2O15127 329 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PCDHGA12O60330 932 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF217O75362 1048 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 C1orf105O95561 183 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PSMA1P25786 263 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PSMA3P25788 255 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 GRK6P43250 576 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 RABIFP47224 123 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ALDH3A2P51648 485 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SRP54P61011 504 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ENPP2Q13822 863 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 WSCD2Q2TBF2 565 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 JAZF1Q86VZ6 243 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MCFD2Q8NI22 146 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SLC25A36Q96CQ1 311 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PDLIM5Q96HC4 596 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 NTMT1Q9BV86 223 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MARCH7Q9H992 704 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PDFQ9HBH1 243 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 HCN3Q9P1Z3 774 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ZDBF2Q9HCK1 2354 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 FAM186AA6NE01 2351 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 LOC100130705A0A1B0GUX0 176 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 CASKO14936 926 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 TRMUO75648 421 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 OR5F1O95221 314 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 AGR2O95994 175 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 HRH2P25021 359 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 CCKBRP32239 447 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 CTHP32929 405 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MYBPC1Q00872 1141 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 OC90Q02509 493 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MXD1Q05195 221 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MEP1AQ16819 746 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 NDUFAF5Q5TEU4 345 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 OR4C11Q6IEV9 310 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SBSNQ6UWP8 590 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 CLIP4Q8N3C7 705 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PACRGLQ8N7B6 248 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 NUP43Q8NFH3 380 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 OR52E1Q8NGJ3 308 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 OR6K6Q8NGW6 343 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 PHOSPHO1Q8TCT1 267 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ZDHHC1Q8WTX9 485 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 ZDHHC12Q96GR4 267 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SH3YL1Q96HL8 342 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-218ENST00000610726 TBX5Q99593 518 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 MS4A12Q9NXJ0 267 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 SLAMF8Q9P0V8 285 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 LRRC42Q9Y546 428 aa6.97□□□□□ -1.29
CSDE1-218ENST00000610726 C1orf226A1L170 272 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ELOA3DA6NLF2 546 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-218ENST00000610726 H3BNX3 289 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 H7C0S8 307 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 TMCC2O75069 709 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 OXTRP30559 389 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-218ENST00000610726 KCNAB2Q13303 367 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 CAMK1Q14012 370 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ELOA3BQ3SY89 546 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 CDKL4Q5MAI5 379 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 DDI2Q5TDH0 399 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 SLC30A6Q6NXT4 461 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ENPP6Q6UWR7 440 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 USP30Q70CQ3 517 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 GATSQ8NAP1 163 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ELOA3Q8NG57 546 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 RMI1Q9H9A7 625 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 IL1RAPQ9NPH3 570 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 PRTFDC1Q9NRG1 225 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 LYARQ9NX58 379 aaKnown RBP6.96□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF624Q9P2J8 865 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-218ENST00000610726 GPR45Q9Y5Y3 372 aa6.96□□□□□ -1.29
CSDE1-218ENST00000610726 PRAMEF26H0Y7S4 382 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 COQ9O75208 318 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 OR2B3O76000 313 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 KLK3P07288 261 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 LINGO3P0C6S8 592 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 PVRP15151 417 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 AGXTP21549 392 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 JAK1P23458 1154 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 TACR1P25103 407 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 GABRA3P34903 492 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 RPS15AP62244 130 aaKnown RBP6.96□□□□□ -1.3
CSDE1-218ENST00000610726 NPTX1Q15818 432 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 DUSP6Q16828 381 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 DEFB133Q30KQ1 61 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 IQCCQ4KMZ1 466 aa6.96□□□□□ -1.3
CSDE1-218ENST00000610726 AFMIDQ63HM1 303 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms