RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 OR56A3Q8NH54 315 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 SREK1Q8WXA9 508 aaKnown RBP16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 DAZLQ92904 295 aaKnown RBP16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 NEIL2Q969S2 332 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 SGCZQ96LD1 299 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 TSNARE1Q96NA8 513 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 RASL10BQ96S79 203 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 NDNQ99608 321 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 ADAP2Q9NPF8 381 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 DMRT3Q9NQL9 472 aa16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 MTRF1LQ9UGC7 380 aaKnown RBP16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 PPIEQ9UNP9 301 aaKnown RBP16.09■□□□□ 0.17
CHMP4A-211ENST00000609024 ZNF469Q96JG9 3925 aaPredicted RBP16.08■□□□□ 0.17
CHMP4A-211ENST00000609024 TRGV5A0A0B4J1U4 118 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 A0A0G2JMM0 328 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 A0A1W2PPB8 328 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 A0A1W2PRS3 328 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 FAM171A2A8MVW0 826 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 KIR3DP1A8MWS1 328 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 SYT5O00445 386 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 GLSO94925 669 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 SERPINA6P08185 405 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 TNNI3P19429 210 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 IL2P60568 153 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 CCZ1BP86790 482 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 CCZ1P86791 482 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 RCN2Q14257 317 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 XKR6Q5GH73 641 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 OPN5Q6U736 354 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 TMPRSS11BQ86T26 416 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 LIX1Q8N485 282 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 GOLM1Q8NBJ4 401 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 OR5L2Q8NGL0 311 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 CCT6BQ92526 530 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 SLCO2A1Q92959 643 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 KLHL31Q9H511 634 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 XAB2Q9HCS7 855 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 NEUROD4Q9HD90 331 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 IARS2Q9NSE4 1012 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 ZNF223Q9UK11 482 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-211ENST00000609024 B3GALT2O43825 422 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 NRDCO43847 1150 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 PRKNO60260 465 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 HCN1O60741 890 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 INHBBP09529 407 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 MLNP12872 115 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 BMP5P22003 454 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 PPP2R1BP30154 601 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 ASCL1P50553 236 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 GPR143P51810 404 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 REEP5Q00765 189 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 STX4Q12846 297 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 PDAP1Q13442 181 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 ELAVL1Q15717 326 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 HSP90AA5PQ58FG0 334 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 ZNF595Q8IYB9 648 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 WFDC11Q8NEX6 87 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 RNASE6Q93091 150 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 OR4K3Q96R72 315 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 NPLQ9BXD5 320 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 PELI2Q9HAT8 420 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 PRM3Q9NNZ6 103 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 FOXD3Q9UJU5 478 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 KCNE2Q9Y6J6 123 aa16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-211ENST00000609024 ZCWPW2A0A1B0GU75 182 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 TUBAL3A6NHL2 446 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 GOLGA8MH3BSY2 632 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 H2AFYO75367 372 aaKnown RBP16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 FGGP02679 453 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 TACR1P25103 407 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 HPDP32754 393 aaPredicted RBP16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 DNASE1L1P49184 302 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 RAB38P57729 211 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 CLNKQ7Z7G1 428 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 CAND1Q86VP6 1230 aaKnown RBP16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 KIF18BQ86Y91 864 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 SCUBE1Q8IWY4 988 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 FBXW8Q8N3Y1 598 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 FAM47BQ8NA70 645 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 MORN4Q8NDC4 146 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 NUDT8Q8WV74 236 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 FBXL8Q96CD0 374 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 SCYL1Q96KG9 808 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 SMR3AQ99954 134 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 OR8D2Q9GZM6 311 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 SPNS1Q9H2V7 528 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 ZNF395Q9H8N7 513 aaPredicted RBP16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 COPS7AQ9UBW8 275 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 CBLCQ9ULV8 474 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
CHMP4A-211ENST00000609024 A0A0G2JN53 185 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 ERI3O43414 337 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 CELA3AP09093 270 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 SMIM10L1P0DMW3 83 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 HK2P52789 917 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms