RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 OR6F1Q8NGZ6 308 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 SETD6Q8TBK2 473 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.28□□□□□ -1.88
HDDC2-207ENST00000608532 GPR148Q8TDV2 347 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 RFT1Q96AA3 541 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 ZIM3Q96PE6 472 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 GBP5Q96PP8 586 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 INTS14Q96SY0 518 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 PRMT1Q99873 361 aaKnown RBP3.28□□□□□ -1.88
HDDC2-207ENST00000608532 DHRS4-AS1Q9P1J3 65 aa3.28□□□□□ -1.88
HDDC2-207ENST00000608532 MRPL11Q9Y3B7 192 aaKnown RBP3.28□□□□□ -1.88
HDDC2-207ENST00000608532 ZNF646O15015 1829 aaPredicted RBP3.28□□□□□ -1.88
HDDC2-207ENST00000608532 FER1L5A0AVI2 2057 aa3.28□□□□□ -1.89
HDDC2-207ENST00000608532 UMODL1Q5DID0 1318 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 PRRC2AP48634 2157 aaKnown RBP3.27□□□□□ -1.89
HDDC2-207ENST00000608532 A0A0B4J203 849 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 A0A1W2PQ72 361 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 C5orf52A6NGY3 159 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SELENOFO60613 162 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 FGF19O95750 216 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 IGHG1P01857 330 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 HCKP08631 526 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 NPBWR1P48145 328 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SLC1A6P48664 564 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 IST1P53990 364 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 TRA2BP62995 288 aaKnown RBP3.27□□□□□ -1.89
HDDC2-207ENST00000608532 FASTKQ14296 549 aaKnown RBP3.27□□□□□ -1.89
HDDC2-207ENST00000608532 CDO1Q16878 200 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 ARMCX5Q6P1M9 558 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 CLEC4GQ6UXB4 293 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SPATA19Q7Z5L4 167 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 KIAA0895Q8NCT3 520 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 OR6T1Q8NGN1 323 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SEPT8Q92599 483 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SGF29Q96ES7 293 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 HSD17B14Q9BPX1 270 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 AP1M1Q9BXS5 423 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 TRIM7Q9C029 511 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 ARMCX1Q9P291 453 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SWAP70Q9UH65 585 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 UBQLN2Q9UHD9 624 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SPATA2Q9UM82 520 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 TMED7Q9Y3B3 224 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 FBXO7Q9Y3I1 522 aa3.27□□□□□ -1.89
HDDC2-207ENST00000608532 HBS1LQ9Y450 684 aaKnown RBP3.27□□□□□ -1.89
HDDC2-207ENST00000608532 SCO2O43819 266 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 DKC1O60832 514 aaKnown RBP eCLIP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 GRAP2O75791 330 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 TSPY3P0CV98 308 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 TSPY8P0CW00 308 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 UMPSP11172 480 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 ID1P41134 155 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 LYZP61626 148 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 POU5F1Q01860 360 aaKnown RBP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 CRMP1Q14194 572 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 TIMM50Q3ZCQ8 353 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 LYPLAL1Q5VWZ2 237 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 CCBE1Q6UXH8 406 aaPredicted RBP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 C4orf19Q8IY42 314 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 NME8Q8N427 588 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 C11orf42Q8N5U0 333 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 BAG1Q99933 345 aaPredicted RBP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 S100A14Q9HCY8 104 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 MED17Q9NVC6 651 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 GTF3C4Q9UKN8 822 aa3.26□□□□□ -1.89
HDDC2-207ENST00000608532 ZNF256Q9Y2P7 627 aaPredicted RBP3.26□□□□□ -1.89
HDDC2-207ENST00000608532 OR5H15A6NDH6 313 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 ANKDD1BA6NHY2 528 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 HMGB1P1B2RPK0 211 aaPredicted RBP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 NEDD8-MDP1E9PL57 170 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 P2RX6O15547 441 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 LRRTM2O43300 516 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 ZNF253O75346 499 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 RLN1P04808 185 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 ACKR3P25106 362 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 TIA1P31483 386 aaKnown RBP eCLIP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 PPIAP62937 165 aaKnown RBP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 KRTAP13-3Q3SY46 172 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 PRR30Q53SZ7 412 aaPredicted RBP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 PLPP4Q5VZY2 271 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 OLFML2AQ68BL7 652 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 PM20D1Q6GTS8 502 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 CASC4Q6P4E1 433 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 SHQ1Q6PI26 577 aaKnown RBP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 ZNF781Q8N8C0 355 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 RNF149Q8NC42 400 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 LSG1Q9H089 658 aaKnown RBP3.25□□□□□ -1.89
HDDC2-207ENST00000608532 CLIC5Q9NZA1 410 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 KIF25-AS1Q9Y6Z4 181 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 POGZQ7Z3K3 1410 aa3.25□□□□□ -1.89
HDDC2-207ENST00000608532 TRAV9-2A0A087WT02 112 aa3.24□□□□□ -1.89
HDDC2-207ENST00000608532 ILVBLA1L0T0 632 aa3.24□□□□□ -1.89
HDDC2-207ENST00000608532 BCLAF3A2AJT9 711 aaKnown RBP3.24□□□□□ -1.89
HDDC2-207ENST00000608532 KBTBD13C9JR72 458 aa3.24□□□□□ -1.89
HDDC2-207ENST00000608532 CTDSPLO15194 276 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms