RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SERINC2Q96SA4 455 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 GPR22Q99680 433 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 RBBP8Q99708 897 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 DPH5Q9H2P9 285 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 CNOT10Q9H9A5 744 aaKnown RBP7.1□□□□□ -1.27
CUX1-219ENST00000606749 LIN28AQ9H9Z2 209 aaKnown RBP7.1□□□□□ -1.27
CUX1-219ENST00000606749 WWOXQ9NZC7 414 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 GRHL1Q9NZI5 618 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 CD274Q9NZQ7 290 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 TXNDC16Q9P2K2 825 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 PYCARDQ9ULZ3 195 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 DAPP1Q9UN19 280 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 KLF13Q9Y2Y9 288 aaPredicted RBP7.1□□□□□ -1.27
CUX1-219ENST00000606749 YARS2Q9Y2Z4 477 aaKnown RBP7.1□□□□□ -1.27
CUX1-219ENST00000606749 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
CUX1-219ENST00000606749 NCOA6Q14686 2063 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 A0A1B0GTH9 108 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MYOCOSA0A1B0GUC4 107 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 E9PLN8 166 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 C19orf84I3L1E1 186 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 PRRG2O14669 202 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 RAD51CO43502 376 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CCNT2O60583 730 aaKnown RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 FAM155BO75949 473 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 OR2J2O76002 312 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ZFAND5O76080 213 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CLDN14O95500 239 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 IFNA16P05015 189 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 GSTA2P09210 222 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 COX6B1P14854 86 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 TFEBP19484 476 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ELAVL4P26378 380 aaKnown RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 CERS1P27544 350 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 SPRP35270 261 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 GMPRP36959 345 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 GP5P40197 560 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 RFC3P40938 356 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CASP2P42575 452 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 KIR3DL1P43629 444 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MEOX1P50221 254 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 SSR4P51571 173 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 RAB10P61026 200 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 TGM3Q08188 693 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CHIT1Q13231 466 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 LAPTM5Q13571 262 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 BMPR2Q13873 1038 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 E2F2Q14209 437 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ZKSCAN8Q15776 578 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 TBCCQ15814 346 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 PDK4Q16654 411 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 HIST2H2ACQ16777 129 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 GRTP1Q5TC63 336 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 HIST2H2AA3Q6FI13 130 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 C16orf47Q6ZP98 133 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 MAATS1Q7Z4T9 603 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MDGA2Q7Z553 956 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ISCA2Q86U28 154 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CYP4Z2PQ8N1L4 340 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 TMEM132CQ8N3T6 1108 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ZFP62Q8NB50 900 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 PDPRQ8NCN5 879 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 SPATA4Q8NEY3 305 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 FAM57AQ8TBR7 257 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 PHF10Q8WUB8 498 aaKnown RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 PTPMT1Q8WUK0 201 aaPredicted RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 MTFMTQ96DP5 389 aaKnown RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 DMRTA2Q96SC8 542 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CSF3RQ99062 836 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 VKORC1Q9BQB6 163 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CCDC77Q9BR77 488 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 EFCAB11Q9BUY7 163 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ALOXE3Q9BYJ1 711 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 CD244Q9BZW8 370 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 LYRM4Q9HD34 91 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 ADAP2Q9NPF8 381 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 DEPPQ9NTK1 212 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MYOTQ9UBF9 498 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 RNF112Q9ULX5 631 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 MRPS33Q9Y291 106 aaKnown RBP7.09□□□□□ -1.27
CUX1-219ENST00000606749 CLCA3PQ9Y6N3 262 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 LRBAP50851 2863 aa7.09□□□□□ -1.27
CUX1-219ENST00000606749 PCNX1Q96RV3 2341 aa7.09□□□□□ -1.28
CUX1-219ENST00000606749 FBN2P35556 2912 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 SYNDIG1LA6NDD5 238 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 A8MVJ9 347 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 WWP2O00308 870 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TFECO14948 347 aaPredicted RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 HS6ST1O60243 411 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 LDB3O75112 727 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PDE9AO76083 593 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TGFB1P01137 390 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 S100BP04271 92 aaPredicted RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 TUBB4AP04350 444 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 SLC35E2BP0CK96 405 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ATP5A1P25705 553 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 PTGS2P35354 604 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 MSH2P43246 934 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms