RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 DDX39BQ13838 428 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 RCN2Q14257 317 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TBCCQ15814 346 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 PLEKHN1Q494U1 663 aaPredicted RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TEX35Q5T0J7 233 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 LGSNQ5TDP6 509 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 B3GNTL1Q67FW5 361 aaPredicted RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 FAM180AQ6UWF9 173 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 IGFL2Q6UWQ7 119 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 Q6ZS92 163 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 GOLGA7Q7Z5G4 137 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 VN1R5Q7Z5H4 357 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 CUZD1Q86UP6 607 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SHISA5Q8N114 240 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 CA13Q8N1Q1 262 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 CISD2Q8N5K1 135 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 PTGR2Q8N8N7 351 aaPredicted RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 FAM47BQ8NA70 645 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 GALNT11Q8NCW6 608 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SRFBP1Q8NEF9 429 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SUN3Q8TAQ9 357 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 DCAKDQ8WVC6 231 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 ISL2Q96A47 359 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 REPS1Q96D71 796 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SNRNP40Q96DI7 357 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 MS4A6EQ96DS6 147 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 MTBPQ96DY7 904 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 WDR34Q96EX3 536 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SMIM10Q96HG1 83 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 IMMP1LQ96LU5 166 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 PTCHD1Q96NR3 888 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 KCNC2Q96PR1 638 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 LMF1Q96S06 567 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SERINC2Q96SA4 455 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 CENPKQ9BS16 269 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 NPLQ9BXD5 320 aaPredicted RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 MS4A8Q9BY19 250 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 ROGDIQ9GZN7 287 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 AICDAQ9GZX7 198 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 ACTR8Q9H981 624 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 KCNK13Q9HB14 408 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TIMMDC1Q9NPL8 285 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 AGPAT4Q9NRZ5 378 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 XPR1Q9UBH6 696 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TMCO1Q9UM00 188 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 ZNF232Q9UNY5 417 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 MRPS33Q9Y291 106 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 MMACHCQ9Y4U1 282 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TNPO3Q9Y5L0 923 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 COPG1Q9Y678 874 aaKnown RBP5.5□□□□□ -1.53
FOCAD-213ENST00000604254 SPACA6W5XKT8 324 aa5.5□□□□□ -1.53
FOCAD-213ENST00000604254 TRAV17A0A0B4J275 112 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 IQANK1A0A1B0GTG1 560 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SLC35F4A4IF30 521 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SYNDIG1LA6NDD5 238 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 OR5H15A6NDH6 313 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 LRRC14BA6NHZ5 514 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SAGE2PA6NJ88 616 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 A8MUA0 341 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 A8MUI8 341 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 FAM227AF5H4B4 570 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SAP18O00422 153 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 CLDN4O14493 209 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 KLK8O60259 260 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 PRAMEF4O60810 478 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 DNAJB6O75190 326 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SH3BGRLO75368 114 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SIX3O95343 332 aaPredicted RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 TGFB1P01137 390 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SNRPAP09012 282 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 FAM153BP0C7A2 387 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 COL6A2P12110 1019 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 CASP2P42575 452 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 TSFMP43897 325 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 CCNG1P51959 295 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SLC26A5P58743 744 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 BTG2P78543 158 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SLC13A2Q13183 592 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 MRPL49Q13405 166 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 GTF2H2Q13888 395 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 RUNX2Q13950 521 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 PCBP2Q15366 365 aaKnown RBP eCLIP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 ADPRMQ3LIE5 342 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 TMEM35AQ53FP2 167 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 PRAMEF9Q5VWM5 478 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 LIPJQ5W064 366 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 FCRLBQ6BAA4 426 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 GTF2H2CQ6P1K8 395 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 METTL2BQ6P1Q9 378 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 ABHD17CQ6PCB6 329 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 CHSY3Q70JA7 882 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 CRLF3Q8IUI8 442 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 ZNF595Q8IYB9 648 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 LAS2Q8IYD9 372 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 BEST3Q8N1M1 668 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
FOCAD-213ENST00000604254 FAM26EQ8N5C1 309 aa5.49□□□□□ -1.53
FOCAD-213ENST00000604254 SLC5A8Q8N695 610 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms