RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	NPFFR2	Q9Y5X5	522 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ABCA1	O95477	2261 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	MEGF8	Q7Z7M0	2845 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	TRBC2	A0A5B9	178 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935		E5RI56	91 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SERPIND1	P05546	499 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	APRT	P07741	180 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	OGN	P20774	298 aa	Known RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	GRK3	P35626	688 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SCTR	P47872	440 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SKP1	P63208	163 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	TPM4	P67936	248 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	CRYZ	Q08257	329 aa	Known RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	NAE1	Q13564	534 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	CAPRIN1	Q14444	709 aa	Known RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	NIPAL1	Q6NVV3	410 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	AGTRAP	Q6RW13	159 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	ABHD13	Q7L211	337 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	CILP2	Q8IUL8	1156 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	LACC1	Q8IV20	430 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	LRRC25	Q8N386	305 aa	Predicted RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	LRRC57	Q8N9N7	239 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	ANKRD53	Q8N9V6	530 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	CD200R1	Q8TD46	325 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	PERP	Q96FX8	193 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SGCZ	Q96LD1	299 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	OR4K3	Q96R72	315 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	KIFC1	Q9BW19	673 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	EXO5	Q9H790	373 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	ACKR4	Q9NPB9	350 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SAMD15	Q9P1V8	674 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	PDE10A	Q9Y233	779 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	PCDHA13	Q9Y5I0	950 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	USF3	Q68DE3	2245 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	MED12	Q93074	2177 aa		10.16	□□□□□ -0.78
NUP62-222	ENST00000600935	SH3D21	A4FU49	640 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	GOLGA6L9	A6NEM1	432 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	AHRR	A9YTQ3	701 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935		E7EVH7	732 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	PSMD12	O00232	456 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	EEF1E1	O43324	174 aa	Known RBP	10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	CNOT4	O95628	575 aa	Known RBP	10.15	□□□□□ -0.78
NUP62-222	ENST00000600935		P04436	131 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	ENO3	P13929	434 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	BMP7	P18075	431 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	HNF4A	P41235	474 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	TRPC1	P48995	793 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	CCR8	P51685	355 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	RGS1	Q08116	209 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	RUNX2	Q13950	521 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	TTLL9	Q3SXZ7	439 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	NSUN5P2	Q63ZY6	315 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	HMBOX1	Q6NT76	420 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	HSDL2	Q6YN16	418 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	VSTM4	Q8IW00	320 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	CPNE9	Q8IYJ1	553 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	KCNJ9	Q92806	393 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	PIGT	Q969N2	578 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	IL22	Q9GZX6	179 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	ZFP64	Q9NPA5	681 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	ADAP2	Q9NPF8	381 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	SYBU	Q9NX95	663 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	ZFP69B	Q9UJL9	534 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	DHRS7	Q9Y394	339 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	HEATR5A	Q86XA9	2040 aa		10.15	□□□□□ -0.78
NUP62-222	ENST00000600935	CR1	P17927	2039 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	MBD3L3	A6NE82	208 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	DEFB108A	A8MXU0	73 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	LIAS	O43766	372 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	F12	P00748	615 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	IFNB1	P01574	187 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	IL2RA	P01589	272 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	NID1	P14543	1247 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	CTSS	P25774	331 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	MGAT1	P26572	445 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	STIP1	P31948	543 aa	Known RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	CETN2	P41208	172 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	HSD17B7	P56937	341 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	RNF4	P78317	190 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	CTBP1	Q13363	440 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	ELAVL1	Q15717	326 aa	Known RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	PHKG1	Q16816	387 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	ZNF791	Q3KP31	576 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	LYPD8	Q6UX82	237 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	IGFBPL1	Q8WX77	278 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	ISL2	Q96A47	359 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	ALKBH8	Q96BT7	664 aa	Known RBP	10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	PYCR2	Q96C36	320 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	GPR21	Q99679	349 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	TIMP4	Q99727	224 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	PRDM14	Q9GZV8	571 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	PRTFDC1	Q9NRG1	225 aa		10.14	□□□□□ -0.79
NUP62-222	ENST00000600935	INTS10	Q9NVR2	710 aa	Known RBP	10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms