RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 OR4C11Q6IEV9 310 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 NIPAL1Q6NVV3 410 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 Q6ZSR9 355 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 METTL4Q8N3J2 472 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 OR5T3Q8NGG3 340 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 OR2T11Q8NH01 316 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CHTF18Q8WVB6 975 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 FKBP10Q96AY3 582 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 FAR2Q96K12 515 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 C7orf26Q96N11 449 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CENPKQ9BS16 269 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CLK4Q9HAZ1 481 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 IGLV3-12A0A075B6K2 115 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SLC28A1O00337 649 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 EEDO75530 441 aaKnown RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 RSL1D1O76021 490 aaKnown RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 LINC00032P0C843 101 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 PIM1P11309 404 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 HIST1H1TP22492 207 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SSR2P43308 183 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 TSFMP43897 325 aaKnown RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SKP1P63208 163 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 OLR1P78380 273 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 GUCY1A3Q02108 690 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 BTKQ06187 659 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 TBR1Q16650 682 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 AP5B1Q2VPB7 878 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 OVCH1Q7RTY7 1134 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 COMMD6Q7Z4G1 85 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 CA13Q8N1Q1 262 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 ACOT4Q8N9L9 421 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 C11orf24Q96F05 449 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 APIPQ96GX9 242 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 C3orf30Q96M34 536 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SERINC2Q96SA4 455 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 NPLQ9BXD5 320 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 ROGDIQ9GZN7 287 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SLC25A18Q9H1K4 315 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 SLC26A1Q9H2B4 701 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 DDX31Q9H8H2 851 aaKnown RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 NMRK1Q9NWW6 199 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 HCN3Q9P1Z3 774 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 IFT80Q9P2H3 777 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-205ENST00000600117 CTSFQ9UBX1 484 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 CROTQ9UKG9 612 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 MAP4K5Q9Y4K4 846 aa17.8■□□□□ 0.44
CCDC9-205ENST00000600117 A0A088AWK7 358 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 A0A0A6YYD5 115 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 CHST10O43529 356 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 ALBP02768 609 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 RAB40ALP0C0E4 278 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 TCN2P20062 427 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 ZNF10P21506 573 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 F8A1P23610 371 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 PRPH2P23942 346 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 MDH1P40925 334 aaKnown RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 DNASE1L3Q13609 305 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 NCF4Q15080 339 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 PDCD2Q16342 344 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 IMPG1Q17R60 797 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 MRM1Q6IN84 353 aaKnown RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 TMEM151BQ8IW70 566 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 DDIASQ8IXT1 998 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 ZCCHC7Q8N3Z6 543 aaKnown RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 ZSCAN1Q8NBB4 408 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 CCDC134Q9H6E4 229 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 COPS7BQ9H9Q2 264 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 SIRT5Q9NXA8 310 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 AHSPQ9NZD4 102 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 TRPC4Q9UBN4 977 aa17.79■□□□□ 0.44
CCDC9-205ENST00000600117 MARCOQ9UEW3 520 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 RP1L1Q8IWN7 2480 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-205ENST00000600117 VSTM2BA6NLU5 285 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 C21orf140B9A014 251 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 C9J4A7 227 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 RGS14O43566 566 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 B3GALT2O43825 422 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 TMPRSS11DO60235 418 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 TPP2P29144 1249 aaPredicted RBP17.78■□□□□ 0.44
CCDC9-205ENST00000600117 RAE1P78406 368 aaKnown RBP17.78■□□□□ 0.44
CCDC9-205ENST00000600117 NKG7Q16617 165 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 MLIPQ5VWP3 458 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 FAM47EQ6ZV65 393 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 NUDT13Q86X67 352 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 CRLF3Q8IUI8 442 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 ZC3H7AQ8IWR0 971 aaKnown RBP17.78■□□□□ 0.44
CCDC9-205ENST00000600117 IL22RA1Q8N6P7 574 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 OR51Q1Q8NH59 317 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 C19orf60Q96EN9 201 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 CCT7Q99832 543 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 KCMF1Q9P0J7 381 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 ADAM29Q9UKF5 820 aa17.78■□□□□ 0.44
CCDC9-205ENST00000600117 ICE1Q9Y2F5 2266 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 CLEC18AA5D8T8 446 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 TCP11X1B4DZS4 312 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms